RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 DYNC1I1O14576 645 aa13.7□□□□□ -0.22
SEC23B-204ENST00000377475 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
SEC23B-204ENST00000377475 ME1P48163 572 aa13.7□□□□□ -0.22
SEC23B-204ENST00000377475 TYRO3Q06418 890 aa13.7□□□□□ -0.22
SEC23B-204ENST00000377475 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
SEC23B-204ENST00000377475 PDCL2Q8N4E4 241 aa13.7□□□□□ -0.22
SEC23B-204ENST00000377475 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
SEC23B-204ENST00000377475 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
SEC23B-204ENST00000377475 AP5Z1O43299 807 aa13.69□□□□□ -0.22
SEC23B-204ENST00000377475 ZNF165P49910 485 aa13.69□□□□□ -0.22
SEC23B-204ENST00000377475 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
SEC23B-204ENST00000377475 ZNF589Q86UQ0 364 aaPredicted RBP13.69□□□□□ -0.22
SEC23B-204ENST00000377475 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
SEC23B-204ENST00000377475 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 ARID5BQ14865 1188 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 WASHC4Q2M389 1173 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
SEC23B-204ENST00000377475 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
SEC23B-204ENST00000377475 NR1I2O75469 434 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 PSMA5P28066 241 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 ZNF771Q7L3S4 317 aaPredicted RBP13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
SEC23B-204ENST00000377475 GOLIM4O00461 696 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 SLC27A2O14975 620 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 DDX58O95786 925 aaKnown RBP13.67□□□□□ -0.22
SEC23B-204ENST00000377475 TNNT1P13805 278 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 Q6ZUG5 572 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
SEC23B-204ENST00000377475 CRB1P82279 1406 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
SEC23B-204ENST00000377475 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
SEC23B-204ENST00000377475 CREBRFQ8IUR6 639 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 TTC5Q8N0Z6 440 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 NFATC2IPQ8NCF5 419 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 TNRQ92752 1358 aa13.66□□□□□ -0.22
SEC23B-204ENST00000377475 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
SEC23B-204ENST00000377475 GRM8O00222 908 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 SMC2O95347 1197 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 TIMM10P62072 90 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 LMTK2Q8IWU2 1503 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 ATP7BP35670 1465 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 SIGLEC1Q9BZZ2 1709 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
SEC23B-204ENST00000377475 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
SEC23B-204ENST00000377475 APPP05067 770 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 MCM5P33992 734 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 TFCP2Q12800 502 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 A2ML1A8K2U0 1454 aa13.65□□□□□ -0.22
SEC23B-204ENST00000377475 ARAP3Q8WWN8 1544 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 CCDC144CPQ8IYA2 1237 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
SEC23B-204ENST00000377475 A0A087WZG4 1122 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 PDCP20941 246 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
SEC23B-204ENST00000377475 SASH1O94885 1247 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 RXRAP19793 462 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 VPS53Q5VIR6 699 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 TTC14Q96N46 770 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 KINO60870 393 aaKnown RBP13.63□□□□□ -0.23
SEC23B-204ENST00000377475 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 KSR2Q6VAB6 950 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 CCAR2Q8N163 923 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms