RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 CNPY2Q9Y2B0 182 aa17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 NECAB1Q8N987 351 aa17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
ZKSCAN4-201ENST00000377294 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 METTL22Q9BUU2 404 aaPredicted RBP17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 COL18A1P39060 1754 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
ZKSCAN4-201ENST00000377294 CCDC173Q0VFZ6 552 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 ANKRD13DQ6ZTN6 518 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 SYT1P21579 422 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 KCNJ4P48050 445 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 HSPA2P54652 639 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 PDRG1Q9NUG6 133 aa17.46■□□□□ 0.39
ZKSCAN4-201ENST00000377294 LRSAM1Q6UWE0 723 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NAP1L5Q96NT1 182 aaPredicted RBP17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 TFCP2Q12800 502 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 CREB3L3Q68CJ9 461 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
ZKSCAN4-201ENST00000377294 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 ME3Q16798 604 aa17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 GJB2P29033 226 aa17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 SLFNL1Q499Z3 407 aa17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 DBNLQ9UJU6 430 aaKnown RBP17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 SMC3Q9UQE7 1217 aa17.44■□□□□ 0.38
ZKSCAN4-201ENST00000377294 EPB41L2O43491 1005 aaKnown RBP17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 STX6O43752 255 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 CABP4P57796 275 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 SLC27A2O14975 620 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 FIBPO43427 364 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 PTPN12Q05209 780 aaKnown RBP17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 CCDC129Q6ZRS4 1044 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 TPCN1Q9ULQ1 816 aa17.43■□□□□ 0.38
ZKSCAN4-201ENST00000377294 COL15A1P39059 1388 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 A0A087WZG4 1122 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 ZSWIM6Q9HCJ5 1215 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 MBD3O95983 291 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 TTLL7Q6ZT98 887 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
ZKSCAN4-201ENST00000377294 GLI3P10071 1580 aa17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
ZKSCAN4-201ENST00000377294 F13A1P00488 732 aa17.39■□□□□ 0.38
ZKSCAN4-201ENST00000377294 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.38
ZKSCAN4-201ENST00000377294 STK3Q13188 491 aa17.39■□□□□ 0.38
ZKSCAN4-201ENST00000377294 MPNDQ8N594 471 aa17.39■□□□□ 0.38
ZKSCAN4-201ENST00000377294 A1BGP04217 495 aa17.39■□□□□ 0.37
ZKSCAN4-201ENST00000377294 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
ZKSCAN4-201ENST00000377294 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
ZKSCAN4-201ENST00000377294 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
ZKSCAN4-201ENST00000377294 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 LMBR1LQ6UX01 489 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 FERMT3Q86UX7 667 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 KCNB2Q92953 911 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 MED23Q9ULK4 1368 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
ZKSCAN4-201ENST00000377294 MRC1P22897 1456 aa17.37■□□□□ 0.37
ZKSCAN4-201ENST00000377294 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
ZKSCAN4-201ENST00000377294 CASP7P55210 303 aa17.37■□□□□ 0.37
ZKSCAN4-201ENST00000377294 ZNF594Q96JF6 807 aaPredicted RBP17.37■□□□□ 0.37
ZKSCAN4-201ENST00000377294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
ZKSCAN4-201ENST00000377294 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms