RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DDX19AQ9NUU7 478 aaKnown RBP15.86■□□□□ 0.13
C9orf47-203ENST00000375851 MAST1Q9Y2H9 1570 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 IL2RBP14784 551 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 RBM10P98175 930 aaKnown RBP15.86■□□□□ 0.13
C9orf47-203ENST00000375851 FSIP1Q8NA03 581 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 SAMD9Q5K651 1589 aa15.86■□□□□ 0.13
C9orf47-203ENST00000375851 ZBTB7BO15156 539 aaPredicted RBP15.85■□□□□ 0.13
C9orf47-203ENST00000375851 NOM1Q5C9Z4 860 aaKnown RBP15.85■□□□□ 0.13
C9orf47-203ENST00000375851 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 ZFYP08048 801 aaPredicted RBP15.85■□□□□ 0.13
C9orf47-203ENST00000375851 CTAGE5O15320 804 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 KLHL10Q6JEL2 608 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 DCAF5Q96JK2 942 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 HSPA2P54652 639 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 G2E3Q7L622 706 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 PLEKHM2Q8IWE5 1019 aa15.85■□□□□ 0.13
C9orf47-203ENST00000375851 LDHCP07864 332 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 USP25Q9UHP3 1055 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
C9orf47-203ENST00000375851 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
C9orf47-203ENST00000375851 MCM5P33992 734 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 TRIM35Q9UPQ4 493 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
C9orf47-203ENST00000375851 LRRC2Q9BYS8 371 aa15.84■□□□□ 0.13
C9orf47-203ENST00000375851 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.13
C9orf47-203ENST00000375851 NLRP5P59047 1200 aa15.83■□□□□ 0.13
C9orf47-203ENST00000375851 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.13
C9orf47-203ENST00000375851 SLF2Q8IX21 1173 aa15.83■□□□□ 0.13
C9orf47-203ENST00000375851 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 METAP2P50579 478 aaKnown RBP eCLIP15.83■□□□□ 0.12
C9orf47-203ENST00000375851 NBPF6Q5VWK0 638 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 NBPF5PQ86XG9 351 aaPredicted RBP15.83■□□□□ 0.12
C9orf47-203ENST00000375851 NBPF4Q96M43 638 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 CCDC194A0A1B0GVG4 234 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 ATP6V1AP38606 617 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 SNX21Q969T3 373 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 PDCL3Q9H2J4 239 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
C9orf47-203ENST00000375851 RFC4P35249 363 aa15.83■□□□□ 0.12
C9orf47-203ENST00000375851 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
C9orf47-203ENST00000375851 ATP10AO60312 1499 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 UBE2HP62256 183 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 DDB1Q16531 1140 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 ZSCAN22P10073 491 aaPredicted RBP15.82■□□□□ 0.12
C9orf47-203ENST00000375851 IQSEC3Q9UPP2 1182 aaPredicted RBP15.82■□□□□ 0.12
C9orf47-203ENST00000375851 PTPRTO14522 1441 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 CHL1O00533 1208 aa15.82■□□□□ 0.12
C9orf47-203ENST00000375851 RBM27Q9P2N5 1060 aaKnown RBP15.82■□□□□ 0.12
C9orf47-203ENST00000375851 SEC24BO95487 1268 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 BAG3O95817 575 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 EPB41L2O43491 1005 aaKnown RBP15.81■□□□□ 0.12
C9orf47-203ENST00000375851 PDE4BQ07343 736 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 ANKRD18AQ8IVF6 992 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
C9orf47-203ENST00000375851 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
C9orf47-203ENST00000375851 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-203ENST00000375851 SLC9C2Q5TAH2 1124 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 SBNO1A3KN83 1393 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 UQCRHLA0A096LP55 91 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 UQCRHP07919 91 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 SETQ01105 290 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-203ENST00000375851 SLC26A6Q9BXS9 759 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 ZSCAN16Q9H4T2 348 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-203ENST00000375851 NIP7Q9Y221 180 aaKnown RBP eCLIP15.8■□□□□ 0.12
C9orf47-203ENST00000375851 BIN1O00499 593 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 TXLNBQ8N3L3 684 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
C9orf47-203ENST00000375851 KIF5BP33176 963 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 SPTY2D1Q68D10 685 aaPredicted RBP15.79■□□□□ 0.12
C9orf47-203ENST00000375851 PANK2Q9BZ23 570 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 ZNF165P49910 485 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 CYP7A1P22680 504 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 CCDC181Q5TID7 509 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
C9orf47-203ENST00000375851 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 PAG1Q9NWQ8 432 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 MYO6Q9UM54 1294 aa15.79■□□□□ 0.12
C9orf47-203ENST00000375851 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
C9orf47-203ENST00000375851 TOM1O60784 492 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 RAB34Q9BZG1 259 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 CHMLP26374 656 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 CLIP2Q9UDT6 1046 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 ZBTB43O43298 467 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 WTAPQ15007 396 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 ZNF790Q6PG37 636 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms