RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 AIDAQ96BJ3 306 aa21.53■■□□□ 1.04
CLIC1-208ENST00000375784 SCN7AQ01118 1682 aa21.53■■□□□ 1.04
CLIC1-208ENST00000375784 TMEM88BA6NKF7 163 aa21.52■■□□□ 1.04
CLIC1-208ENST00000375784 ERVV-1B6SEH8 477 aa21.52■■□□□ 1.04
CLIC1-208ENST00000375784 ITGBL1O95965 494 aaPredicted RBP21.52■■□□□ 1.04
CLIC1-208ENST00000375784 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
CLIC1-208ENST00000375784 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
CLIC1-208ENST00000375784 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
CLIC1-208ENST00000375784 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
CLIC1-208ENST00000375784 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
CLIC1-208ENST00000375784 SLX4Q8IY92 1834 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 PDIA6Q15084 440 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 HDGFL1Q5TGJ6 251 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 WBP1LQ9NX94 342 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 MAP3K15Q6ZN16 1313 aa21.5■■□□□ 1.03
CLIC1-208ENST00000375784 DDX21Q9NR30 783 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLIC1-208ENST00000375784 NIP7Q9Y221 180 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLIC1-208ENST00000375784 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
CLIC1-208ENST00000375784 HLFQ16534 295 aa21.48■■□□□ 1.03
CLIC1-208ENST00000375784 CCDC93Q567U6 631 aa21.48■■□□□ 1.03
CLIC1-208ENST00000375784 EAPPQ56P03 285 aaPredicted RBP21.48■■□□□ 1.03
CLIC1-208ENST00000375784 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
CLIC1-208ENST00000375784 IL16Q14005 1332 aa21.48■■□□□ 1.03
CLIC1-208ENST00000375784 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 LBX1P52954 281 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 TPTE2Q6XPS3 522 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
CLIC1-208ENST00000375784 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
CLIC1-208ENST00000375784 HACL1Q9UJ83 578 aa21.47■■□□□ 1.03
CLIC1-208ENST00000375784 SCN4AP35499 1836 aa21.46■■□□□ 1.03
CLIC1-208ENST00000375784 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
CLIC1-208ENST00000375784 ANXA1P04083 346 aa21.46■■□□□ 1.03
CLIC1-208ENST00000375784 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.03
CLIC1-208ENST00000375784 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
CLIC1-208ENST00000375784 CLEC11AQ9Y240 323 aa21.46■■□□□ 1.03
CLIC1-208ENST00000375784 ZNF541Q9H0D2 1346 aa21.46■■□□□ 1.03
CLIC1-208ENST00000375784 NPR1P16066 1061 aa21.45■■□□□ 1.02
CLIC1-208ENST00000375784 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
CLIC1-208ENST00000375784 AIMP1Q12904 312 aaKnown RBP21.45■■□□□ 1.02
CLIC1-208ENST00000375784 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
CLIC1-208ENST00000375784 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
CLIC1-208ENST00000375784 ZNF277Q9NRM2 450 aaPredicted RBP21.45■■□□□ 1.02
CLIC1-208ENST00000375784 CHPF2Q9P2E5 772 aa21.45■■□□□ 1.02
CLIC1-208ENST00000375784 ARFGEF2Q9Y6D5 1785 aa21.44■■□□□ 1.02
CLIC1-208ENST00000375784 KLRG2A4D1S0 409 aaPredicted RBP21.44■■□□□ 1.02
CLIC1-208ENST00000375784 RASSF10A6NK89 507 aa21.44■■□□□ 1.02
CLIC1-208ENST00000375784 EPHX2P34913 555 aa21.44■■□□□ 1.02
CLIC1-208ENST00000375784 GIGYF2Q6Y7W6 1299 aaKnown RBP21.44■■□□□ 1.02
CLIC1-208ENST00000375784 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
CLIC1-208ENST00000375784 HYPKQ9NX55 129 aa21.44■■□□□ 1.02
CLIC1-208ENST00000375784 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
CLIC1-208ENST00000375784 DEFB115Q30KQ5 88 aa21.43■■□□□ 1.02
CLIC1-208ENST00000375784 PNMA8AQ86V59 439 aaPredicted RBP21.43■■□□□ 1.02
CLIC1-208ENST00000375784 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
CLIC1-208ENST00000375784 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
CLIC1-208ENST00000375784 HSPA8P11142 646 aaKnown RBP21.42■■□□□ 1.02
CLIC1-208ENST00000375784 MAP1SQ66K74 1059 aaPredicted RBP21.42■■□□□ 1.02
CLIC1-208ENST00000375784 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
CLIC1-208ENST00000375784 BCORQ6W2J9 1755 aa21.42■■□□□ 1.02
CLIC1-208ENST00000375784 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
CLIC1-208ENST00000375784 CNTROBQ8N137 903 aa21.42■■□□□ 1.02
CLIC1-208ENST00000375784 NYXQ9GZU5 481 aa21.42■■□□□ 1.02
CLIC1-208ENST00000375784 FAM177BA6PVY3 158 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 FZD9O00144 591 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 SLC34A2O95436 690 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 CCDC30Q5VVM6 783 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 ABHD8Q96I13 439 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
CLIC1-208ENST00000375784 RNF123Q5XPI4 1314 aa21.4■■□□□ 1.02
CLIC1-208ENST00000375784 GPTP24298 496 aa21.4■■□□□ 1.02
CLIC1-208ENST00000375784 MAP2K1Q02750 393 aaPredicted RBP21.4■■□□□ 1.02
CLIC1-208ENST00000375784 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
CLIC1-208ENST00000375784 WDR33Q9C0J8 1336 aaKnown RBP21.39■■□□□ 1.01
CLIC1-208ENST00000375784 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
CLIC1-208ENST00000375784 ZNF34Q8IZ26 560 aa21.39■■□□□ 1.01
CLIC1-208ENST00000375784 IARSP41252 1262 aaKnown RBP21.38■■□□□ 1.01
CLIC1-208ENST00000375784 ANKRD13DQ6ZTN6 518 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 GPC2Q8N158 579 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 SYNE4Q8N205 404 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 TSPYL6Q8N831 410 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 MYH16Q9H6N6 1097 aa21.38■■□□□ 1.01
CLIC1-208ENST00000375784 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
CLIC1-208ENST00000375784 TWISTNBQ3B726 338 aaPredicted RBP21.37■■□□□ 1.01
CLIC1-208ENST00000375784 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
CLIC1-208ENST00000375784 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
CLIC1-208ENST00000375784 TCIRG1Q13488 830 aa21.36■■□□□ 1.01
CLIC1-208ENST00000375784 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
CLIC1-208ENST00000375784 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
CLIC1-208ENST00000375784 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
CLIC1-208ENST00000375784 SUSD4Q5VX71 490 aa21.35■■□□□ 1.01
CLIC1-208ENST00000375784 UBN2Q6ZU65 1347 aa21.34■■□□□ 1.01
CLIC1-208ENST00000375784 UTP14AQ9BVJ6 771 aaKnown RBP21.34■■□□□ 1.01
CLIC1-208ENST00000375784 IBTKQ9P2D0 1353 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms