RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 DALRD3Q5D0E6 543 aaKnown RBP20.52■□□□□ 0.88
C11orf88-202ENST00000375618 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
C11orf88-202ENST00000375618 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
C11orf88-202ENST00000375618 ARFGEF1Q9Y6D6 1849 aa20.52■□□□□ 0.88
C11orf88-202ENST00000375618 PI4KAP2A4QPH2 592 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 GTF2E1P29083 439 aaPredicted RBP20.51■□□□□ 0.87
C11orf88-202ENST00000375618 FLIIQ13045 1269 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 PPP1R42Q7Z4L9 355 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 PI4KAP1Q8N8J0 262 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
C11orf88-202ENST00000375618 MYD88Q99836 296 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 RIC1Q4ADV7 1423 aa20.51■□□□□ 0.87
C11orf88-202ENST00000375618 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
C11orf88-202ENST00000375618 TTLL6Q8N841 843 aa20.5■□□□□ 0.87
C11orf88-202ENST00000375618 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
C11orf88-202ENST00000375618 IGKV5-2P06315 115 aa20.49■□□□□ 0.87
C11orf88-202ENST00000375618 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
C11orf88-202ENST00000375618 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
C11orf88-202ENST00000375618 STYK1Q6J9G0 422 aa20.49■□□□□ 0.87
C11orf88-202ENST00000375618 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
C11orf88-202ENST00000375618 SLC10A5Q5PT55 438 aa20.48■□□□□ 0.87
C11orf88-202ENST00000375618 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
C11orf88-202ENST00000375618 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
C11orf88-202ENST00000375618 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
C11orf88-202ENST00000375618 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
C11orf88-202ENST00000375618 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
C11orf88-202ENST00000375618 FAM89AQ96GI7 184 aa20.47■□□□□ 0.87
C11orf88-202ENST00000375618 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
C11orf88-202ENST00000375618 CACNA1SQ13698 1873 aa20.47■□□□□ 0.87
C11orf88-202ENST00000375618 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
C11orf88-202ENST00000375618 NPR1P16066 1061 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 YY1P25490 414 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
C11orf88-202ENST00000375618 ARHGAP27Q6ZUM4 889 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 JARID2Q92833 1246 aaPredicted RBP20.46■□□□□ 0.87
C11orf88-202ENST00000375618 CHD4Q14839 1912 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 LAMB2P55268 1798 aa20.46■□□□□ 0.87
C11orf88-202ENST00000375618 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
C11orf88-202ENST00000375618 F6X3S4 739 aa20.45■□□□□ 0.86
C11orf88-202ENST00000375618 FKBP5Q13451 457 aaPredicted RBP20.45■□□□□ 0.86
C11orf88-202ENST00000375618 CWF19L2Q2TBE0 894 aaKnown RBP20.45■□□□□ 0.86
C11orf88-202ENST00000375618 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
C11orf88-202ENST00000375618 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
C11orf88-202ENST00000375618 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
C11orf88-202ENST00000375618 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
C11orf88-202ENST00000375618 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
C11orf88-202ENST00000375618 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
C11orf88-202ENST00000375618 BCL2L13Q9BXK5 485 aa20.44■□□□□ 0.86
C11orf88-202ENST00000375618 C21orf2O43822 256 aa20.43■□□□□ 0.86
C11orf88-202ENST00000375618 PRELPP51888 382 aa20.43■□□□□ 0.86
C11orf88-202ENST00000375618 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
C11orf88-202ENST00000375618 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
C11orf88-202ENST00000375618 COL4A1P02462 1669 aa20.42■□□□□ 0.86
C11orf88-202ENST00000375618 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
C11orf88-202ENST00000375618 HOXA10P31260 410 aaPredicted RBP20.42■□□□□ 0.86
C11orf88-202ENST00000375618 RASSF7Q02833 373 aa20.42■□□□□ 0.86
C11orf88-202ENST00000375618 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
C11orf88-202ENST00000375618 DNAAF4Q8WXU2 420 aa20.42■□□□□ 0.86
C11orf88-202ENST00000375618 NFKBIEO00221 500 aa20.41■□□□□ 0.86
C11orf88-202ENST00000375618 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
C11orf88-202ENST00000375618 NLRP3Q96P20 1036 aa20.41■□□□□ 0.86
C11orf88-202ENST00000375618 CWC25Q9NXE8 425 aaPredicted RBP20.41■□□□□ 0.86
C11orf88-202ENST00000375618 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
C11orf88-202ENST00000375618 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
C11orf88-202ENST00000375618 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.85
C11orf88-202ENST00000375618 BEND3Q5T5X7 828 aa20.39■□□□□ 0.85
C11orf88-202ENST00000375618 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.85
C11orf88-202ENST00000375618 SNED1Q8TER0 1413 aa20.38■□□□□ 0.85
C11orf88-202ENST00000375618 ABCC4O15439 1325 aa20.38■□□□□ 0.85
C11orf88-202ENST00000375618 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
C11orf88-202ENST00000375618 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
C11orf88-202ENST00000375618 FER1L6Q2WGJ9 1857 aa20.37■□□□□ 0.85
C11orf88-202ENST00000375618 ALDH1L2Q3SY69 923 aa20.37■□□□□ 0.85
C11orf88-202ENST00000375618 LINS1Q8NG48 757 aa20.37■□□□□ 0.85
C11orf88-202ENST00000375618 RBM17Q96I25 401 aaKnown RBP20.37■□□□□ 0.85
C11orf88-202ENST00000375618 TAF1P21675 1872 aa20.37■□□□□ 0.85
C11orf88-202ENST00000375618 H7C1W4 665 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 CASP7P55210 303 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 GCKRQ14397 625 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 SF3B3Q15393 1217 aaKnown RBP20.36■□□□□ 0.85
C11orf88-202ENST00000375618 C9orf131Q5VYM1 1079 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 SBF1O95248 1867 aa20.36■□□□□ 0.85
C11orf88-202ENST00000375618 CDHR2Q9BYE9 1310 aa20.35■□□□□ 0.85
C11orf88-202ENST00000375618 CT47B1P0C2W7 299 aaPredicted RBP20.35■□□□□ 0.85
C11orf88-202ENST00000375618 RARSP54136 660 aaKnown RBP20.35■□□□□ 0.85
C11orf88-202ENST00000375618 UBE3BQ7Z3V4 1068 aa20.34■□□□□ 0.85
C11orf88-202ENST00000375618 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
C11orf88-202ENST00000375618 PPEF1O14829 653 aaPredicted RBP20.33■□□□□ 0.85
C11orf88-202ENST00000375618 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
C11orf88-202ENST00000375618 PDE8AO60658 829 aa20.32■□□□□ 0.84
C11orf88-202ENST00000375618 GRAPQ13588 217 aa20.32■□□□□ 0.84
C11orf88-202ENST00000375618 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
C11orf88-202ENST00000375618 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
C11orf88-202ENST00000375618 GRAPLQ8TC17 118 aaPredicted RBP20.32■□□□□ 0.84
C11orf88-202ENST00000375618 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
C11orf88-202ENST00000375618 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms