RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 BICC1Q9H694 974 aaKnown RBP14□□□□□ -0.17
MCF2L-202ENST00000375597 GOLGA6L19H0YKK7 550 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 DYNC1I1O14576 645 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
MCF2L-202ENST00000375597 MYD88Q99836 296 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 NLRP2Q9NX02 1062 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 TYRO3Q06418 890 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 ZRSR1Q15695 479 aaKnown RBP14□□□□□ -0.17
MCF2L-202ENST00000375597 ATP2B3Q16720 1220 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 CLEC17AQ6ZS10 378 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 BRF1Q92994 677 aa14□□□□□ -0.17
MCF2L-202ENST00000375597 EAF2Q96CJ1 260 aaPredicted RBP14□□□□□ -0.17
MCF2L-202ENST00000375597 MYO5BQ9ULV0 1848 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-202ENST00000375597 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 HYPKQ9NX55 129 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 NR1I2O75469 434 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 ERICH4A6NGS2 130 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
MCF2L-202ENST00000375597 KCNA6P17658 529 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 ZNF165P49910 485 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 SUCLG2Q96I99 432 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 ME1P48163 572 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 UBE3BQ7Z3V4 1068 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
MCF2L-202ENST00000375597 INTS4Q96HW7 963 aaKnown RBP13.98□□□□□ -0.17
MCF2L-202ENST00000375597 KCNF1Q9H3M0 494 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 KIF20BQ96Q89 1820 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 TCHHQ07283 1943 aa13.98□□□□□ -0.17
MCF2L-202ENST00000375597 KNDC1Q76NI1 1749 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-202ENST00000375597 OSBPL3Q9H4L5 887 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 TNNT1P13805 278 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
MCF2L-202ENST00000375597 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 ATP2B1P20020 1258 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 ANAPC15P60006 121 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 GJB4Q9NTQ9 266 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
MCF2L-202ENST00000375597 TMEM131LA2VDJ0 1609 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 A0A0G2JLW4 131 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 SDF4Q9BRK5 362 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 SRCAPQ6ZRS2 3230 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.17
MCF2L-202ENST00000375597 MYRIPQ8NFW9 859 aa13.96□□□□□ -0.18
MCF2L-202ENST00000375597 FLT4P35916 1363 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 SLC27A2O14975 620 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CRB1P82279 1406 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 SMC2O95347 1197 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 RXRAP19793 462 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.181e-7■■■■■ 33.2
MCF2L-202ENST00000375597 APOBRQ0VD83 1088 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 HS1BP3Q53T59 392 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 Q6ZUG5 572 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CABLES1Q8TDN4 633 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 GOLIM4O00461 696 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 BEND3Q5T5X7 828 aa13.95□□□□□ -0.18
MCF2L-202ENST00000375597 GPHNQ9NQX3 736 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-202ENST00000375597 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-202ENST00000375597 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
MCF2L-202ENST00000375597 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
MCF2L-202ENST00000375597 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
MCF2L-202ENST00000375597 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
MCF2L-202ENST00000375597 CCAR2Q8N163 923 aaKnown RBP13.94□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
MCF2L-202ENST00000375597 TIMM10P62072 90 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 WASHC4Q2M389 1173 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 XAGE3Q8WTP9 111 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-202ENST00000375597 TTC14Q96N46 770 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 RNF20Q5VTR2 975 aa13.93□□□□□ -0.18
MCF2L-202ENST00000375597 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
MCF2L-202ENST00000375597 USP27XA6NNY8 438 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 TFCP2Q12800 502 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 FAM200AQ8TCP9 573 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 STAP2Q9UGK3 403 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 MRVI1Q9Y6F6 885 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 CPSF1Q10570 1443 aaKnown RBP13.92□□□□□ -0.18
MCF2L-202ENST00000375597 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-202ENST00000375597 CCDC94Q9BW85 323 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-202ENST00000375597 ATP7BP35670 1465 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 SALL3Q9BXA9 1300 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 SASH1O94885 1247 aa13.92□□□□□ -0.18
MCF2L-202ENST00000375597 HSP90AB4PQ58FF6 505 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms