RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF790Q6PG37 636 aa14.47□□□□□ -0.09
C9orf3-203ENST00000375315 PI4KAP1Q8N8J0 262 aa14.47□□□□□ -0.09
C9orf3-203ENST00000375315 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-203ENST00000375315 USP16Q9Y5T5 823 aa14.47□□□□□ -0.09
C9orf3-203ENST00000375315 HCLS1P14317 486 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-203ENST00000375315 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
C9orf3-203ENST00000375315 ACSBG1Q96GR2 724 aa14.46□□□□□ -0.09
C9orf3-203ENST00000375315 NGLY1Q96IV0 654 aa14.46□□□□□ -0.09
C9orf3-203ENST00000375315 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
C9orf3-203ENST00000375315 KCNF1Q9H3M0 494 aa14.46□□□□□ -0.1
C9orf3-203ENST00000375315 FAM182BQ5T319 152 aa14.45□□□□□ -0.1
C9orf3-203ENST00000375315 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
C9orf3-203ENST00000375315 CCDC112Q8NEF3 446 aa14.45□□□□□ -0.1
C9orf3-203ENST00000375315 GIGYF1O75420 1035 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-203ENST00000375315 GSPT1P15170 499 aaKnown RBP14.44□□□□□ -0.1
C9orf3-203ENST00000375315 RGS22Q8NE09 1264 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 MCM2P49736 904 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-203ENST00000375315 CEMIPQ8WUJ3 1361 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 REC8O95072 547 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 DCAF5Q96JK2 942 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
C9orf3-203ENST00000375315 ABCC4O15439 1325 aa14.43□□□□□ -0.1
C9orf3-203ENST00000375315 SMARCA5O60264 1052 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-203ENST00000375315 MX1P20591 662 aa14.43□□□□□ -0.1
C9orf3-203ENST00000375315 SIRT2Q8IXJ6 389 aa14.43□□□□□ -0.1
C9orf3-203ENST00000375315 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
C9orf3-203ENST00000375315 GADD45BO75293 160 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-203ENST00000375315 TNNT3P45378 269 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-203ENST00000375315 CWF19L2Q2TBE0 894 aaKnown RBP14.42□□□□□ -0.1
C9orf3-203ENST00000375315 CPDO75976 1380 aa14.42□□□□□ -0.1
C9orf3-203ENST00000375315 CHRM1P11229 460 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-203ENST00000375315 TTC22Q5TAA0 569 aa14.42□□□□□ -0.1
C9orf3-203ENST00000375315 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
C9orf3-203ENST00000375315 SPC24Q8NBT2 197 aa14.42□□□□□ -0.1
C9orf3-203ENST00000375315 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
C9orf3-203ENST00000375315 TNNT1P13805 278 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 PLEKHM2Q8IWE5 1019 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 COL5A2P05997 1499 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-203ENST00000375315 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-203ENST00000375315 EXOC5O00471 708 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 C16orf45Q96MC5 204 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-203ENST00000375315 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-203ENST00000375315 ASAP1Q9ULH1 1129 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 EXOC6BQ9Y2D4 811 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 MAP3K2Q9Y2U5 619 aa14.41□□□□□ -0.1
C9orf3-203ENST00000375315 A1BGP04217 495 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 CERS3Q8IU89 383 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 C16orf71Q8IYS4 520 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-203ENST00000375315 GDPD2Q9HCC8 539 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 ROBO1Q9Y6N7 1651 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
C9orf3-203ENST00000375315 COPS6Q7L5N1 327 aa14.4□□□□□ -0.1
C9orf3-203ENST00000375315 INTS4Q96HW7 963 aaKnown RBP14.4□□□□□ -0.1
C9orf3-203ENST00000375315 LRRFIP2Q9Y608 721 aaKnown RBP14.4□□□□□ -0.1
C9orf3-203ENST00000375315 TMOD3Q9NYL9 352 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 DBF4Q9UBU7 674 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 PTPRCP08575 1304 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 PCDH11XQ9BZA7 1347 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 PCDH11YQ9BZA8 1340 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 ATP5J2-PTCD1G3V325 749 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 NEK4P51957 841 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 MEX3CQ5U5Q3 659 aaKnown RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 XAGE3Q8WTP9 111 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 WDR33Q9C0J8 1336 aaKnown RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 CUL4AQ13619 759 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 TRERF1Q96PN7 1200 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
C9orf3-203ENST00000375315 YY1AP1Q9H869 796 aa14.39□□□□□ -0.11
C9orf3-203ENST00000375315 NBPF7P0C2Y1 421 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-203ENST00000375315 KCNQ4P56696 695 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 NAA30Q147X3 362 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-203ENST00000375315 FAM53CQ9NYF3 392 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 CYP2C19P33261 490 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 TMEM87AQ8NBN3 555 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 DNAAF4Q8WXU2 420 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 FMNL2Q96PY5 1086 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 SRCIN1Q9C0H9 1055 aa14.38□□□□□ -0.11
C9orf3-203ENST00000375315 C9orf78Q9NZ63 289 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-203ENST00000375315 PTGS1P23219 599 aa14.37□□□□□ -0.11
C9orf3-203ENST00000375315 HNRNPH2P55795 449 aaKnown RBP14.37□□□□□ -0.11
C9orf3-203ENST00000375315 KMT5BQ4FZB7 885 aa14.37□□□□□ -0.11
C9orf3-203ENST00000375315 UBTFL1P0CB47 393 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-203ENST00000375315 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
C9orf3-203ENST00000375315 CCT4P50991 539 aaKnown RBP14.37□□□□□ -0.11
C9orf3-203ENST00000375315 OTUD7AQ8TE49 926 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-203ENST00000375315 SECISBP2LQ93073 1101 aaKnown RBP14.37□□□□□ -0.11
C9orf3-203ENST00000375315 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
C9orf3-203ENST00000375315 ERC2O15083 957 aa14.36□□□□□ -0.11
C9orf3-203ENST00000375315 SNRPA1P09661 255 aaKnown RBP14.36□□□□□ -0.11
C9orf3-203ENST00000375315 UBE2HP62256 183 aa14.36□□□□□ -0.11
C9orf3-203ENST00000375315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.118e-7■■■■■ 31.5
C9orf3-203ENST00000375315 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms