RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 JAKMIP2Q96AA8 810 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 F13A1P00488 732 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 KIF5BP33176 963 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 FERMT1Q9BQL6 677 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 VAV2P52735 878 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
PTCH1-204ENST00000375290 FAM177A1Q8N128 213 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-204ENST00000375290 MRPS27Q92552 414 aaKnown RBP11.68□□□□□ -0.54
PTCH1-204ENST00000375290 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 TMX3Q96JJ7 454 aa11.68□□□□□ -0.54
PTCH1-204ENST00000375290 CCDC38Q502W7 563 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 IQCA1Q86XH1 822 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 NAP1L3Q99457 506 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 CPSF2Q9P2I0 782 aaKnown RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.549e-10■■■■■ 86.9
PTCH1-204ENST00000375290 PLCD4Q9BRC7 762 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 NLRP6P59044 892 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 PRG4Q92954 1404 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 UBASH3AP57075 661 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
PTCH1-204ENST00000375290 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
PTCH1-204ENST00000375290 GBP6Q6ZN66 633 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 FSD2A1L4K1 749 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
PTCH1-204ENST00000375290 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-204ENST00000375290 CAMK4Q16566 473 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-204ENST00000375290 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
PTCH1-204ENST00000375290 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 TACC1O75410 805 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 EVA1CP58658 441 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 HCLS1P14317 486 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-204ENST00000375290 PDE4CQ08493 712 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 CEP83Q9Y592 693 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 LIG1P18858 919 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
PTCH1-204ENST00000375290 NBPF7P0C2Y1 421 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-204ENST00000375290 TNIP1Q15025 636 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-204ENST00000375290 CFAP57Q96MR6 1250 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 SLC12A7Q9Y666 1083 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 PPFIA1Q13136 1202 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
PTCH1-204ENST00000375290 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
PTCH1-204ENST00000375290 NEK1Q96PY6 1258 aa11.65□□□□□ -0.55
PTCH1-204ENST00000375290 PPP1R9BQ96SB3 815 aa11.65□□□□□ -0.55
PTCH1-204ENST00000375290 JADE2Q9NQC1 790 aa11.65□□□□□ -0.55
PTCH1-204ENST00000375290 POGZQ7Z3K3 1410 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
PTCH1-204ENST00000375290 PPP2R5EQ16537 467 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 KIAA0753Q2KHM9 967 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 OTUD6BQ8N6M0 293 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 WDR66Q8TBY9 1149 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 CDK13Q14004 1512 aaKnown RBP11.64□□□□□ -0.55
PTCH1-204ENST00000375290 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 CLGNO14967 610 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 KIF5AQ12840 1032 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 ZNF213O14771 459 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-204ENST00000375290 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-204ENST00000375290 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-204ENST00000375290 NCOA7Q8NI08 942 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
PTCH1-204ENST00000375290 KIF4AO95239 1232 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 SYT1P21579 422 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 TYRO3Q06418 890 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 SYKP43405 635 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 ABCC2Q92887 1545 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms