RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ATAD2Q6PL18 1390 aa9.06□□□□□ -0.96
PMS1-202ENST00000374826 STAG2Q8N3U4 1231 aa9.05□□□□□ -0.96
PMS1-202ENST00000374826 C9orf172C9J069 976 aa9.04□□□□□ -0.96
PMS1-202ENST00000374826 DYRK3O43781 588 aa9.04□□□□□ -0.96
PMS1-202ENST00000374826 FOXD4L6Q3SYB3 417 aaPredicted RBP9.04□□□□□ -0.96
PMS1-202ENST00000374826 FOXD4L3Q6VB84 417 aaPredicted RBP9.04□□□□□ -0.96
PMS1-202ENST00000374826 BTLAQ7Z6A9 289 aa9.04□□□□□ -0.96
PMS1-202ENST00000374826 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
PMS1-202ENST00000374826 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
PMS1-202ENST00000374826 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
PMS1-202ENST00000374826 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
PMS1-202ENST00000374826 GAS2L2Q8NHY3 880 aa9.03□□□□□ -0.96
PMS1-202ENST00000374826 PSMG3-AS1Q96PY0 264 aa9.03□□□□□ -0.96
PMS1-202ENST00000374826 IGFLR1Q9H665 355 aa9.03□□□□□ -0.96
PMS1-202ENST00000374826 HIF1AQ16665 826 aa9.02□□□□□ -0.97
PMS1-202ENST00000374826 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.97
PMS1-202ENST00000374826 GSX2Q9BZM3 304 aa9.02□□□□□ -0.97
PMS1-202ENST00000374826 UBE2OQ9C0C9 1292 aaKnown RBP9.02□□□□□ -0.97
PMS1-202ENST00000374826 A0A0A0MRY4 1105 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 SELPP16109 830 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 ADGRE1Q14246 886 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 CLUAP1Q96AJ1 413 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 SLC6A14Q9UN76 642 aa9.01□□□□□ -0.97
PMS1-202ENST00000374826 ELNP15502 786 aa9□□□□□ -0.97
PMS1-202ENST00000374826 RASA1P20936 1047 aa9□□□□□ -0.97
PMS1-202ENST00000374826 PRSS36Q5K4E3 855 aa9□□□□□ -0.97
PMS1-202ENST00000374826 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
PMS1-202ENST00000374826 NUDT8Q8WV74 236 aa9□□□□□ -0.97
PMS1-202ENST00000374826 NGLY1Q96IV0 654 aa9□□□□□ -0.97
PMS1-202ENST00000374826 JPH1Q9HDC5 661 aaPredicted RBP9□□□□□ -0.97
PMS1-202ENST00000374826 SEC13P55735 322 aa8.99□□□□□ -0.97
PMS1-202ENST00000374826 ILDR2Q71H61 639 aa8.99□□□□□ -0.97
PMS1-202ENST00000374826 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
PMS1-202ENST00000374826 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
PMS1-202ENST00000374826 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
PMS1-202ENST00000374826 H2AFB1P0C5Y9 115 aa8.98□□□□□ -0.97
PMS1-202ENST00000374826 H2AFB2P0C5Z0 115 aa8.98□□□□□ -0.97
PMS1-202ENST00000374826 AFF1P51825 1210 aaKnown RBP8.98□□□□□ -0.97
PMS1-202ENST00000374826 RAC1P63000 192 aa8.98□□□□□ -0.97
PMS1-202ENST00000374826 MBTPS1Q14703 1052 aa8.98□□□□□ -0.97
PMS1-202ENST00000374826 DNAJB12Q9NXW2 375 aaKnown RBP8.98□□□□□ -0.97
PMS1-202ENST00000374826 DMGDHQ9UI17 866 aaKnown RBP8.98□□□□□ -0.97
PMS1-202ENST00000374826 NRG1Q02297 640 aaPredicted RBP8.97□□□□□ -0.97
PMS1-202ENST00000374826 CCINQ13939 588 aa8.97□□□□□ -0.97
PMS1-202ENST00000374826 ARTNQ5T4W7 220 aa8.97□□□□□ -0.97
PMS1-202ENST00000374826 IER5Q5VY09 327 aa8.97□□□□□ -0.97
PMS1-202ENST00000374826 PSAPL1Q6NUJ1 521 aa8.97□□□□□ -0.97
PMS1-202ENST00000374826 PROSER2Q86WR7 435 aaPredicted RBP8.97□□□□□ -0.97
PMS1-202ENST00000374826 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.97□□□□□ -0.97
PMS1-202ENST00000374826 RTN1Q16799 776 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 TXNRD3Q86VQ6 643 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 DMRTC2Q8IXT2 367 aaPredicted RBP8.96□□□□□ -0.98
PMS1-202ENST00000374826 PNMA5Q96PV4 448 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 BCS1LQ9Y276 419 aa8.96□□□□□ -0.98
PMS1-202ENST00000374826 TGFBR3LH3BV60 316 aa8.95□□□□□ -0.98
PMS1-202ENST00000374826 RGS9O75916 674 aaPredicted RBP8.95□□□□□ -0.98
PMS1-202ENST00000374826 FNBP4Q8N3X1 1017 aaPredicted RBP8.95□□□□□ -0.98
PMS1-202ENST00000374826 ZFP64Q9NPA5 681 aa8.95□□□□□ -0.98
PMS1-202ENST00000374826 MAFBQ9Y5Q3 323 aaPredicted RBP8.95□□□□□ -0.98
PMS1-202ENST00000374826 NFKB1P19838 968 aa8.94□□□□□ -0.98
PMS1-202ENST00000374826 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
PMS1-202ENST00000374826 NAGPAQ9UK23 515 aa8.94□□□□□ -0.98
PMS1-202ENST00000374826 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
PMS1-202ENST00000374826 GLMNQ92990 594 aa8.93□□□□□ -0.98
PMS1-202ENST00000374826 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
PMS1-202ENST00000374826 A6NJR5 290 aa8.92□□□□□ -0.98
PMS1-202ENST00000374826 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
PMS1-202ENST00000374826 GRNP28799 593 aaKnown RBP8.92□□□□□ -0.98
PMS1-202ENST00000374826 INPP5BP32019 993 aa8.92□□□□□ -0.98
PMS1-202ENST00000374826 PTK7Q13308 1070 aa8.92□□□□□ -0.98
PMS1-202ENST00000374826 PCSK7Q16549 785 aa8.92□□□□□ -0.98
PMS1-202ENST00000374826 ABCC9O60706 1549 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 LGR5O75473 907 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 IGFBP4P22692 258 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 DPYDQ12882 1025 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
PMS1-202ENST00000374826 MSL1Q68DK7 614 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 FAM35AQ86V20 835 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
PMS1-202ENST00000374826 USP21Q9UK80 565 aa8.91□□□□□ -0.98
PMS1-202ENST00000374826 ZBTB42B2RXF5 422 aa8.9□□□□□ -0.98
PMS1-202ENST00000374826 EPB42P16452 691 aa8.9□□□□□ -0.98
PMS1-202ENST00000374826 CRTC2Q53ET0 693 aaPredicted RBP8.9□□□□□ -0.98
PMS1-202ENST00000374826 C11orf16Q9NQ32 467 aa8.9□□□□□ -0.98
PMS1-202ENST00000374826 CPB1P15086 417 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 IDH3AP50213 366 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 GRIK5Q16478 980 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 DTWD1Q8N5C7 304 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 TRPM4Q8TD43 1214 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 KLK14Q9P0G3 267 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 ZFATQ9P243 1243 aa8.89□□□□□ -0.99
PMS1-202ENST00000374826 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
PMS1-202ENST00000374826 TARSP26639 723 aaKnown RBP8.88□□□□□ -0.99
PMS1-202ENST00000374826 FBXO11Q86XK2 927 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms