RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
HDHD3-202ENST00000374180 CACNA1FO60840 1977 aa20.4■□□□□ 0.86
HDHD3-202ENST00000374180 ALDH1L2Q3SY69 923 aa20.39■□□□□ 0.85
HDHD3-202ENST00000374180 ADCY9O60503 1353 aa20.38■□□□□ 0.85
HDHD3-202ENST00000374180 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
HDHD3-202ENST00000374180 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
HDHD3-202ENST00000374180 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 N4BP2Q86UW6 1770 aaPredicted RBP20.37■□□□□ 0.85
HDHD3-202ENST00000374180 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
HDHD3-202ENST00000374180 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 DNAAF4Q8WXU2 420 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 BCS1LQ9Y276 419 aa20.37■□□□□ 0.85
HDHD3-202ENST00000374180 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
HDHD3-202ENST00000374180 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
HDHD3-202ENST00000374180 ZNF622Q969S3 477 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDHD3-202ENST00000374180 SH3TC1Q8TE82 1336 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 ARFGEF2Q9Y6D5 1785 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 ABCC12Q96J65 1359 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 SRGNP10124 158 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 SLC10A5Q5PT55 438 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 FAM89AQ96GI7 184 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
HDHD3-202ENST00000374180 ANKRD36CQ5JPF3 1778 aa20.35■□□□□ 0.85
HDHD3-202ENST00000374180 F6X3S4 739 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 GRIN3BO60391 1043 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 IGKV5-2P06315 115 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 KIAA1551Q9HCM1 1747 aa20.34■□□□□ 0.85
HDHD3-202ENST00000374180 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.85
HDHD3-202ENST00000374180 RARSP54136 660 aaKnown RBP20.33■□□□□ 0.85
HDHD3-202ENST00000374180 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.85
HDHD3-202ENST00000374180 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
HDHD3-202ENST00000374180 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
HDHD3-202ENST00000374180 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
HDHD3-202ENST00000374180 NPR1P16066 1061 aa20.32■□□□□ 0.84
HDHD3-202ENST00000374180 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
HDHD3-202ENST00000374180 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
HDHD3-202ENST00000374180 PTPRCP08575 1304 aa20.32■□□□□ 0.84
HDHD3-202ENST00000374180 NEURL1BA8MQ27 555 aa20.31■□□□□ 0.84
HDHD3-202ENST00000374180 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
HDHD3-202ENST00000374180 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
HDHD3-202ENST00000374180 PCCAP05165 728 aaPredicted RBP20.3■□□□□ 0.84
HDHD3-202ENST00000374180 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
HDHD3-202ENST00000374180 SLC4A10Q6U841 1118 aa20.3■□□□□ 0.84
HDHD3-202ENST00000374180 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
HDHD3-202ENST00000374180 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
HDHD3-202ENST00000374180 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
HDHD3-202ENST00000374180 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
HDHD3-202ENST00000374180 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
HDHD3-202ENST00000374180 BEND3Q5T5X7 828 aa20.29■□□□□ 0.84
HDHD3-202ENST00000374180 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
HDHD3-202ENST00000374180 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
HDHD3-202ENST00000374180 ALDH1B1P30837 517 aa20.28■□□□□ 0.84
HDHD3-202ENST00000374180 GCKRQ14397 625 aa20.28■□□□□ 0.84
HDHD3-202ENST00000374180 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
HDHD3-202ENST00000374180 RBM17Q96I25 401 aaKnown RBP20.27■□□□□ 0.84
HDHD3-202ENST00000374180 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
HDHD3-202ENST00000374180 HOXA10P31260 410 aaPredicted RBP20.26■□□□□ 0.83
HDHD3-202ENST00000374180 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
HDHD3-202ENST00000374180 ARHGAP27Q6ZUM4 889 aa20.26■□□□□ 0.83
HDHD3-202ENST00000374180 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
HDHD3-202ENST00000374180 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
HDHD3-202ENST00000374180 H7C1W4 665 aa20.25■□□□□ 0.83
HDHD3-202ENST00000374180 BCAR3O75815 825 aa20.25■□□□□ 0.83
HDHD3-202ENST00000374180 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
HDHD3-202ENST00000374180 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
HDHD3-202ENST00000374180 COL11A2P13942 1736 aaPredicted RBP20.25■□□□□ 0.83
HDHD3-202ENST00000374180 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
HDHD3-202ENST00000374180 C21orf2O43822 256 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 PDE8AO60658 829 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 UBE3BQ7Z3V4 1068 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 DLEC1Q9Y238 1755 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 CDHR2Q9BYE9 1310 aa20.24■□□□□ 0.83
HDHD3-202ENST00000374180 SF3B3Q15393 1217 aaKnown RBP20.24■□□□□ 0.83
HDHD3-202ENST00000374180 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
HDHD3-202ENST00000374180 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
HDHD3-202ENST00000374180 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
HDHD3-202ENST00000374180 ARHGAP45Q92619 1136 aa20.22■□□□□ 0.83
HDHD3-202ENST00000374180 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
HDHD3-202ENST00000374180 C9orf78Q9NZ63 289 aaPredicted RBP20.22■□□□□ 0.83
HDHD3-202ENST00000374180 GRM8O00222 908 aa20.21■□□□□ 0.83
HDHD3-202ENST00000374180 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
HDHD3-202ENST00000374180 SOGA3Q5TF21 947 aa20.2■□□□□ 0.82
HDHD3-202ENST00000374180 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
HDHD3-202ENST00000374180 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
HDHD3-202ENST00000374180 ARFGEF1Q9Y6D6 1849 aa20.19■□□□□ 0.82
HDHD3-202ENST00000374180 BBOX1O75936 387 aa20.19■□□□□ 0.82
HDHD3-202ENST00000374180 CASP7P55210 303 aa20.19■□□□□ 0.82
HDHD3-202ENST00000374180 ABCC4O15439 1325 aa20.19■□□□□ 0.82
HDHD3-202ENST00000374180 CCT4P50991 539 aaKnown RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 CTSWP56202 376 aa20.18■□□□□ 0.82
HDHD3-202ENST00000374180 DDX60Q8IY21 1712 aaKnown RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 PPEF1O14829 653 aaPredicted RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 GRAPQ13588 217 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms