RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
SNRNP40-202ENST00000373720 LRRFIP1Q32MZ4 808 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-202ENST00000373720 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
SNRNP40-202ENST00000373720 CCDC191Q8NCU4 936 aa10.59□□□□□ -0.71
SNRNP40-202ENST00000373720 ZNF496Q96IT1 587 aaPredicted RBP10.59□□□□□ -0.71
SNRNP40-202ENST00000373720 TNS2Q63HR2 1409 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 KCNQ3O43525 872 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 COPS6Q7L5N1 327 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 C16orf71Q8IYS4 520 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 NECTIN2Q92692 538 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 CHMP4CQ96CF2 233 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
SNRNP40-202ENST00000373720 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 RGL2O15211 777 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 STARD3NLO95772 234 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 MCM4P33991 863 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 DEKP35659 375 aaKnown RBP10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 XAGE3Q8WTP9 111 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 SGIP1Q9BQI5 828 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 ZNF335Q9H4Z2 1342 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-202ENST00000373720 ABCA3Q99758 1704 aa10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 PAPPAQ13219 1627 aa10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 SMARCA5O60264 1052 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 RAB3GAP1Q15042 981 aa10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 AK7Q96M32 723 aa10.56□□□□□ -0.72
SNRNP40-202ENST00000373720 H7C1W4 665 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 SGSM2O43147 1006 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 CIAO1O76071 339 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 IGKV5-2P06315 115 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 HSPA4P34932 840 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 CHRNA2Q15822 529 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 TMOD3Q9NYL9 352 aa10.55□□□□□ -0.72
SNRNP40-202ENST00000373720 TUBGCP6Q96RT7 1819 aa10.54□□□□□ -0.72
SNRNP40-202ENST00000373720 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
SNRNP40-202ENST00000373720 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
SNRNP40-202ENST00000373720 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
SNRNP40-202ENST00000373720 USP16Q9Y5T5 823 aa10.54□□□□□ -0.72
SNRNP40-202ENST00000373720 PLCH1Q4KWH8 1693 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ABCC12Q96J65 1359 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 APBB1O00213 710 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 EXOC5O00471 708 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 FRAT2O75474 233 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ATP5JP18859 108 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 PSMA5P28066 241 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 CUL4AQ13619 759 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 KRT32Q14532 448 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 IER5LQ5T953 404 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 KCNB2Q92953 911 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 MYD88Q99836 296 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 PLA2G12BQ9BX93 195 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ALDH8A1Q9H2A2 487 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 BICC1Q9H694 974 aaKnown RBP10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 ANO2Q9NQ90 1003 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
SNRNP40-202ENST00000373720 DISP2A7MBM2 1401 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 A0A087WZG4 1122 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 SLC39A6Q13433 755 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 PROSER3Q2NL68 480 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 CWF19L2Q2TBE0 894 aaKnown RBP10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 SUCLG2Q96I99 432 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
SNRNP40-202ENST00000373720 MYL6BP14649 208 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 KIF6Q6ZMV9 814 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 AACSQ86V21 672 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 DDX17Q92841 729 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 KAZALD1Q96I82 304 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 IL1RAPL2Q9NP60 686 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 SH2B1Q9NRF2 756 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 ATP6V1DQ9Y5K8 247 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 CDHR2Q9BYE9 1310 aa10.51□□□□□ -0.73
SNRNP40-202ENST00000373720 C5P01031 1676 aa10.5□□□□□ -0.73
SNRNP40-202ENST00000373720 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms