RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
TMEM254-201ENST00000372273 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
TMEM254-201ENST00000372273 SCN7AQ01118 1682 aa12.15□□□□□ -0.46
TMEM254-201ENST00000372273 METTL22Q9BUU2 404 aaPredicted RBP12.15□□□□□ -0.46
TMEM254-201ENST00000372273 NOB1Q9ULX3 412 aaKnown RBP12.15□□□□□ -0.46
TMEM254-201ENST00000372273 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
TMEM254-201ENST00000372273 C10orf71Q711Q0 1435 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
TMEM254-201ENST00000372273 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
TMEM254-201ENST00000372273 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 GPR162Q16538 588 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 ZNF622Q969S3 477 aaKnown RBP eCLIP12.14□□□□□ -0.47
TMEM254-201ENST00000372273 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
TMEM254-201ENST00000372273 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
TMEM254-201ENST00000372273 PLIN1O60240 522 aa12.13□□□□□ -0.47
TMEM254-201ENST00000372273 ST5P78524 1137 aa12.13□□□□□ -0.47
TMEM254-201ENST00000372273 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
TMEM254-201ENST00000372273 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
TMEM254-201ENST00000372273 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
TMEM254-201ENST00000372273 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
TMEM254-201ENST00000372273 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
TMEM254-201ENST00000372273 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 NUP98P52948 1817 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 TGFB2P61812 414 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 HSP90AB3PQ58FF7 597 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
TMEM254-201ENST00000372273 H0YIN7 160 aa12.11□□□□□ -0.47
TMEM254-201ENST00000372273 SRGNP10124 158 aa12.11□□□□□ -0.47
TMEM254-201ENST00000372273 PARP10Q53GL7 1025 aa12.11□□□□□ -0.47
TMEM254-201ENST00000372273 BEND3Q5T5X7 828 aa12.11□□□□□ -0.47
TMEM254-201ENST00000372273 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
TMEM254-201ENST00000372273 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
TMEM254-201ENST00000372273 RGL2O15211 777 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 SH3TC1Q8TE82 1336 aa12.1□□□□□ -0.47
TMEM254-201ENST00000372273 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-201ENST00000372273 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-201ENST00000372273 PDE6BP35913 854 aa12.09□□□□□ -0.47
TMEM254-201ENST00000372273 GCKRQ14397 625 aa12.09□□□□□ -0.47
TMEM254-201ENST00000372273 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
TMEM254-201ENST00000372273 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
TMEM254-201ENST00000372273 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
TMEM254-201ENST00000372273 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-201ENST00000372273 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-201ENST00000372273 C21orf2O43822 256 aa12.08□□□□□ -0.48
TMEM254-201ENST00000372273 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
TMEM254-201ENST00000372273 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
TMEM254-201ENST00000372273 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
TMEM254-201ENST00000372273 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
TMEM254-201ENST00000372273 TRIM27P14373 513 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
TMEM254-201ENST00000372273 NRXN2Q9P2S2 1712 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
TMEM254-201ENST00000372273 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 PRPF40BQ6NWY9 871 aaKnown RBP12.07□□□□□ -0.48
TMEM254-201ENST00000372273 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
TMEM254-201ENST00000372273 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
TMEM254-201ENST00000372273 PTPRCP08575 1304 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 MASTLQ96GX5 879 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 PCCAP05165 728 aaPredicted RBP12.06□□□□□ -0.48
TMEM254-201ENST00000372273 RLBP1P12271 317 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 ARHGAP27Q6ZUM4 889 aa12.06□□□□□ -0.48
TMEM254-201ENST00000372273 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
TMEM254-201ENST00000372273 H7C1W4 665 aa12.05□□□□□ -0.48
TMEM254-201ENST00000372273 CASP7P55210 303 aa12.05□□□□□ -0.48
TMEM254-201ENST00000372273 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-201ENST00000372273 KIAA1551Q9HCM1 1747 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 NPR1P16066 1061 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
TMEM254-201ENST00000372273 USP44Q9H0E7 712 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 COL4A1P02462 1669 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 GRM8O00222 908 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
TMEM254-201ENST00000372273 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 KAZALD1Q96I82 304 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
TMEM254-201ENST00000372273 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-201ENST00000372273 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
TMEM254-201ENST00000372273 ABCC4O15439 1325 aa12.03□□□□□ -0.48
TMEM254-201ENST00000372273 RASSF7Q02833 373 aa12.03□□□□□ -0.48
TMEM254-201ENST00000372273 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
TMEM254-201ENST00000372273 PANK1Q8TE04 598 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms