RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 TPTE2Q6XPS3 522 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 PPP1R42Q7Z4L9 355 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 SYNE4Q8N205 404 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
TMEM53-203ENST00000372242 JARID2Q92833 1246 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 UTP14AQ9BVJ6 771 aaKnown RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 CWC25Q9NXE8 425 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 PPP1R1BQ9UD71 204 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
TMEM53-203ENST00000372242 NRXN2Q9P2S2 1712 aa20.7■□□□□ 0.9
TMEM53-203ENST00000372242 KLHL34Q8N239 644 aa20.7■□□□□ 0.9
TMEM53-203ENST00000372242 SRCIN1Q9C0H9 1055 aa20.7■□□□□ 0.9
TMEM53-203ENST00000372242 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-203ENST00000372242 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
TMEM53-203ENST00000372242 ERFEQ4G0M1 354 aa20.69■□□□□ 0.9
TMEM53-203ENST00000372242 FAM89AQ96GI7 184 aa20.69■□□□□ 0.9
TMEM53-203ENST00000372242 ABCC4O15439 1325 aa20.69■□□□□ 0.9
TMEM53-203ENST00000372242 GCKRQ14397 625 aa20.68■□□□□ 0.9
TMEM53-203ENST00000372242 RLBP1P12271 317 aa20.67■□□□□ 0.9
TMEM53-203ENST00000372242 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
TMEM53-203ENST00000372242 LRP5O75197 1615 aa20.67■□□□□ 0.9
TMEM53-203ENST00000372242 ABCC12Q96J65 1359 aa20.67■□□□□ 0.9
TMEM53-203ENST00000372242 IBTKQ9P2D0 1353 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-203ENST00000372242 SH3TC1Q8TE82 1336 aa20.66■□□□□ 0.9
TMEM53-203ENST00000372242 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
TMEM53-203ENST00000372242 ST5P78524 1137 aa20.66■□□□□ 0.9
TMEM53-203ENST00000372242 FTSJ3Q8IY81 847 aaKnown RBP20.66■□□□□ 0.9
TMEM53-203ENST00000372242 DZIP1LQ8IYY4 767 aaKnown RBP20.66■□□□□ 0.9
TMEM53-203ENST00000372242 ZBTB38Q8NAP3 1195 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-203ENST00000372242 PANK1Q8TE04 598 aa20.66■□□□□ 0.9
TMEM53-203ENST00000372242 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
TMEM53-203ENST00000372242 CCT4P50991 539 aaKnown RBP20.65■□□□□ 0.9
TMEM53-203ENST00000372242 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
TMEM53-203ENST00000372242 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
TMEM53-203ENST00000372242 FHDC1Q9C0D6 1143 aaPredicted RBP20.65■□□□□ 0.9
TMEM53-203ENST00000372242 PCCAP05165 728 aaPredicted RBP20.64■□□□□ 0.9
TMEM53-203ENST00000372242 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.9
TMEM53-203ENST00000372242 INTS3Q68E01 1043 aaKnown RBP20.64■□□□□ 0.9
TMEM53-203ENST00000372242 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
TMEM53-203ENST00000372242 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
TMEM53-203ENST00000372242 ANKRD31Q8N7Z5 1873 aa20.63■□□□□ 0.89
TMEM53-203ENST00000372242 H7C1W4 665 aa20.63■□□□□ 0.89
TMEM53-203ENST00000372242 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
TMEM53-203ENST00000372242 BRIP1Q9BX63 1249 aa20.63■□□□□ 0.89
TMEM53-203ENST00000372242 C9orf78Q9NZ63 289 aaPredicted RBP20.63■□□□□ 0.89
TMEM53-203ENST00000372242 N4BP2Q86UW6 1770 aaPredicted RBP20.63■□□□□ 0.89
TMEM53-203ENST00000372242 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
TMEM53-203ENST00000372242 GRM8O00222 908 aa20.62■□□□□ 0.89
TMEM53-203ENST00000372242 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
TMEM53-203ENST00000372242 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
TMEM53-203ENST00000372242 IRS4O14654 1257 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-203ENST00000372242 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-203ENST00000372242 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
TMEM53-203ENST00000372242 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
TMEM53-203ENST00000372242 CD2APQ9Y5K6 639 aa20.62■□□□□ 0.89
TMEM53-203ENST00000372242 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
TMEM53-203ENST00000372242 CASP7P55210 303 aa20.61■□□□□ 0.89
TMEM53-203ENST00000372242 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
TMEM53-203ENST00000372242 CHRNA5P30532 468 aa20.6■□□□□ 0.89
TMEM53-203ENST00000372242 SLC10A5Q5PT55 438 aa20.6■□□□□ 0.89
TMEM53-203ENST00000372242 ITPRIPQ8IWB1 547 aa20.6■□□□□ 0.89
TMEM53-203ENST00000372242 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
TMEM53-203ENST00000372242 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
TMEM53-203ENST00000372242 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
TMEM53-203ENST00000372242 MS4A1P11836 297 aa20.59■□□□□ 0.89
TMEM53-203ENST00000372242 PDE6BP35913 854 aa20.59■□□□□ 0.89
TMEM53-203ENST00000372242 CDHR2Q9BYE9 1310 aa20.58■□□□□ 0.89
TMEM53-203ENST00000372242 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
TMEM53-203ENST00000372242 MEIS3Q99687 375 aa20.58■□□□□ 0.89
TMEM53-203ENST00000372242 COG6Q9Y2V7 657 aa20.58■□□□□ 0.89
TMEM53-203ENST00000372242 C2CD5Q86YS7 1000 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 UTYO14607 1347 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 DPEP1P16444 411 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 WWC3Q9ULE0 1092 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 RIC1Q4ADV7 1423 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 LAMB2P55268 1798 aa20.57■□□□□ 0.88
TMEM53-203ENST00000372242 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
TMEM53-203ENST00000372242 KLRG2A4D1S0 409 aaPredicted RBP20.56■□□□□ 0.88
TMEM53-203ENST00000372242 TGFB2P61812 414 aa20.56■□□□□ 0.88
TMEM53-203ENST00000372242 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
TMEM53-203ENST00000372242 H0YIN7 160 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 PDE8AO60658 829 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-203ENST00000372242 GOLGB1Q14789 3259 aaKnown RBP20.55■□□□□ 0.88
TMEM53-203ENST00000372242 SRGNP10124 158 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 KCNA3P22001 575 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 MVPQ14764 893 aaKnown RBP20.55■□□□□ 0.88
TMEM53-203ENST00000372242 EPHA10Q5JZY3 1008 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 KAZALD1Q96I82 304 aa20.55■□□□□ 0.88
TMEM53-203ENST00000372242 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-203ENST00000372242 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-203ENST00000372242 CRY2Q49AN0 593 aa20.54■□□□□ 0.88
TMEM53-203ENST00000372242 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
TMEM53-203ENST00000372242 CTSWP56202 376 aa20.53■□□□□ 0.88
TMEM53-203ENST00000372242 FOXO4P98177 505 aa20.53■□□□□ 0.88
TMEM53-203ENST00000372242 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.88
TMEM53-203ENST00000372242 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-203ENST00000372242 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms