RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ZNF75DP51815 510 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 BRF1Q92994 677 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 ZEB2O60315 1214 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 HSF2BPO75031 334 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 MRPS27Q92552 414 aaKnown RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 ZHX3Q9H4I2 956 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 FAM173BQ6P4H8 233 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 CDK13Q14004 1512 aaKnown RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 PER1O15534 1290 aaPredicted RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 USO1O60763 962 aaKnown RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 MYL6BP14649 208 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 TAF7Q15545 349 aaPredicted RBP14.59□□□□□ -0.07
GPC4-201ENST00000370828 GPT2Q8TD30 523 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 DCTPP1Q9H773 170 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 CBX8Q9HC52 389 aa14.59□□□□□ -0.07
GPC4-201ENST00000370828 CPA1P15085 419 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 LRMPQ12912 555 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 CCDC178Q5BJE1 867 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 CCDC102BQ68D86 513 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 HDXQ7Z353 690 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 RABEP2Q9H5N1 569 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
GPC4-201ENST00000370828 SCLT1Q96NL6 688 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.08
GPC4-201ENST00000370828 SYKP43405 635 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 EVI5LQ96CN4 794 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.08
GPC4-201ENST00000370828 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 IL16Q14005 1332 aa14.58□□□□□ -0.08
GPC4-201ENST00000370828 GOLGA8BA8MQT2 603 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
GPC4-201ENST00000370828 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 CTAGE9A4FU28 777 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 PTPRCP08575 1304 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
GPC4-201ENST00000370828 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
GPC4-201ENST00000370828 ERCC6LQ2NKX8 1250 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.57□□□□□ -0.08
GPC4-201ENST00000370828 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
GPC4-201ENST00000370828 N4BP3O15049 544 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 FLIIQ13045 1269 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 RBM8AQ9Y5S9 174 aaKnown RBP14.56□□□□□ -0.08
GPC4-201ENST00000370828 ZNF569Q5MCW4 686 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 PPM1EQ8WY54 764 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 SEPT11Q9NVA2 429 aaKnown RBP14.56□□□□□ -0.08
GPC4-201ENST00000370828 PYCARDQ9ULZ3 195 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 SSBP05455 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
GPC4-201ENST00000370828 NAA25Q14CX7 972 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 MIPOL1Q8TD10 442 aa14.56□□□□□ -0.08
GPC4-201ENST00000370828 WASF1Q92558 559 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 CCDC97Q96F63 343 aaPredicted RBP14.55□□□□□ -0.08
GPC4-201ENST00000370828 HYPKQ9NX55 129 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 TDRD12Q587J7 1177 aaKnown RBP14.55□□□□□ -0.08
GPC4-201ENST00000370828 CCDC114Q96M63 670 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 SYCP1Q15431 976 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 CACNA2D4Q7Z3S7 1137 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 RHPN1Q8TCX5 695 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 CAPZA3Q96KX2 299 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
GPC4-201ENST00000370828 FKBP15Q5T1M5 1219 aa14.55□□□□□ -0.08
GPC4-201ENST00000370828 ZNF853P0CG23 659 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 CCDC121Q6ZUS5 278 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 FAM76AQ8TAV0 307 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
GPC4-201ENST00000370828 PIP4K2BP78356 416 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 PSME1Q06323 249 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 CKAP4Q07065 602 aaKnown RBP14.54□□□□□ -0.08
GPC4-201ENST00000370828 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 C8orf58Q8NAV2 365 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 UBAC1Q9BSL1 405 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
GPC4-201ENST00000370828 ATAD2Q6PL18 1390 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 OPA1O60313 960 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 CHMLP26374 656 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 SMC1AQ14683 1233 aaKnown RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 RTL1A6NKG5 1358 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 FBLN1P23142 703 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 ALS2CR12Q96Q35 445 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 NLRP2Q9NX02 1062 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 PLEKHO1Q53GL0 409 aaPredicted RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 ZNF530Q6P9A1 599 aaPredicted RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 AFAP1L1Q8TED9 768 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 NACAP1Q9BZK3 213 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms