RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CEP170BQ9Y4F5 1589 aaPredicted RBP4.95□□□□□ -1.62
MCF2-202ENST00000370573 SLIT1O75093 1534 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 ADGRB1O14514 1584 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 TTLL8A6PVC2 850 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 PRM3Q9NNZ6 103 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 LAMC1P11047 1609 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.94□□□□□ -1.62
MCF2-202ENST00000370573 CTSOP43234 321 aaPredicted RBP4.94□□□□□ -1.62
MCF2-202ENST00000370573 SCTRP47872 440 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
MCF2-202ENST00000370573 ADAMTS19Q8TE59 1207 aa4.94□□□□□ -1.62
MCF2-202ENST00000370573 SOS2Q07890 1332 aaPredicted RBP4.94□□□□□ -1.62
MCF2-202ENST00000370573 ASXL1Q8IXJ9 1541 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 ALKQ9UM73 1620 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 SOCS7O14512 581 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 TSGA10IPQ3SY00 556 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 KDF1Q8NAX2 398 aaPredicted RBP4.93□□□□□ -1.62
MCF2-202ENST00000370573 TESK2Q96S53 571 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 POLMQ9NP87 494 aaPredicted RBP4.93□□□□□ -1.62
MCF2-202ENST00000370573 PCDHB11Q9Y5F2 797 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 SETBP1Q9Y6X0 1596 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 NRXN3Q9Y4C0 1643 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 ZNF142P52746 1687 aaPredicted RBP4.93□□□□□ -1.62
MCF2-202ENST00000370573 SPINT1O43278 529 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 SRPK2P78362 688 aaKnown RBP4.93□□□□□ -1.62
MCF2-202ENST00000370573 SEPT12Q8IYM1 358 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 TRAK1Q9UPV9 953 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 EID1Q9Y6B2 187 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 METP08581 1390 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 PLEKHG1Q9ULL1 1385 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 ADAMTS13Q76LX8 1427 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 SCAF11Q99590 1463 aaKnown RBP4.93□□□□□ -1.62
MCF2-202ENST00000370573 IQGAP1P46940 1657 aa4.93□□□□□ -1.62
MCF2-202ENST00000370573 MED14O60244 1454 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 WASHC2AQ641Q2 1341 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 RFX1P22670 979 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 SLC26A8Q96RN1 970 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 CDCA7Q9BWT1 371 aaPredicted RBP4.92□□□□□ -1.62
MCF2-202ENST00000370573 STK26Q9P289 416 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 CEP126Q9P2H0 1117 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 SETD1AO15047 1707 aaKnown RBP4.92□□□□□ -1.62
MCF2-202ENST00000370573 ADH1AP07327 375 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 ANKLE2Q86XL3 938 aa4.92□□□□□ -1.62
MCF2-202ENST00000370573 YTHDC2Q9H6S0 1430 aaKnown RBP4.91□□□□□ -1.62
MCF2-202ENST00000370573 CCDC7Q96M83 1385 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 KIF7Q2M1P5 1343 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 HSPA2P54652 639 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 DDX10Q13206 875 aaKnown RBP4.91□□□□□ -1.62
MCF2-202ENST00000370573 TBX22Q9Y458 520 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 E9PSI1 815 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 RNF20Q5VTR2 975 aa4.91□□□□□ -1.62
MCF2-202ENST00000370573 DIEXFQ68CQ4 756 aaKnown RBP4.91□□□□□ -1.62
MCF2-202ENST00000370573 CCDC85AQ96PX6 553 aaPredicted RBP4.91□□□□□ -1.62
MCF2-202ENST00000370573 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.62
MCF2-202ENST00000370573 DISP3Q9P2K9 1392 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 ERBB4Q15303 1308 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 ATP5J2-PTCD1G3V325 749 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 MEN1O00255 615 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 BRD1O95696 1058 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 PTGIRP43119 386 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 CC2D2BQ6DHV5 1058 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 SLC16A10Q8TF71 515 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 PBXIP1Q96AQ6 731 aa4.9□□□□□ -1.62
MCF2-202ENST00000370573 PTPRUQ92729 1446 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 ABCC11Q96J66 1382 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 CENPJQ9HC77 1338 aaPredicted RBP4.9□□□□□ -1.63
MCF2-202ENST00000370573 PTSQ03393 145 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.9□□□□□ -1.63
MCF2-202ENST00000370573 PRICKLE2Q7Z3G6 844 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 WAPLQ7Z5K2 1190 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 PRAM1Q96QH2 718 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 RAB6BQ9NRW1 208 aa4.9□□□□□ -1.63
MCF2-202ENST00000370573 LMTK3Q96Q04 1460 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 ERVK-9P63128 1117 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 SAFB2Q14151 953 aaKnown RBP eCLIP4.89□□□□□ -1.63
MCF2-202ENST00000370573 HDGFL1Q5TGJ6 251 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 EIF3AQ14152 1382 aaKnown RBP4.89□□□□□ -1.63
MCF2-202ENST00000370573 PLEKHH1Q9ULM0 1364 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 ARHGEF28Q8N1W1 1705 aaKnown RBP4.89□□□□□ -1.63
MCF2-202ENST00000370573 A0A1W2PRU2 124 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 H3BM21 787 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 STAU1O95793 577 aaKnown RBP4.89□□□□□ -1.63
MCF2-202ENST00000370573 MCCD1P59942 119 aaPredicted RBP4.89□□□□□ -1.63
MCF2-202ENST00000370573 KCNA1Q09470 495 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 SEMA3FQ13275 785 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 SLFNL1Q499Z3 407 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 RNF217Q8TC41 542 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 SIRT1Q96EB6 747 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 OSBPL3Q9H4L5 887 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 ARHGEF10LQ9HCE6 1279 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 AMOTL2Q9Y2J4 779 aa4.89□□□□□ -1.63
MCF2-202ENST00000370573 NPHP4O75161 1426 aaPredicted RBP4.89□□□□□ -1.63
MCF2-202ENST00000370573 TECPR2O15040 1411 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 PPFIA3O75145 1194 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 GMPRP36959 345 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 TMF1P82094 1093 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 OXLD1Q5BKU9 147 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 RNF135Q8IUD6 432 aa4.88□□□□□ -1.63
MCF2-202ENST00000370573 POLR3GLQ9BT43 218 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 1148.3 ms