RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 L3MBTL3Q96JM7 780 aaPredicted RBP21.05■□□□□ 0.96
VMA21-202ENST00000370361 DDX21Q9NR30 783 aaKnown RBP eCLIP21.05■□□□□ 0.96
VMA21-202ENST00000370361 SCN4AP35499 1836 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 NEUROD2Q15784 382 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 UTP14AQ9BVJ6 771 aaKnown RBP21.04■□□□□ 0.96
VMA21-202ENST00000370361 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
VMA21-202ENST00000370361 ADAMTS8Q9UP79 889 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
VMA21-202ENST00000370361 SLC10A5Q5PT55 438 aa21.03■□□□□ 0.96
VMA21-202ENST00000370361 KLRG1Q96E93 195 aa21.03■□□□□ 0.96
VMA21-202ENST00000370361 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
VMA21-202ENST00000370361 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
VMA21-202ENST00000370361 POTECB2RU33 542 aa21.02■□□□□ 0.96
VMA21-202ENST00000370361 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.96
VMA21-202ENST00000370361 SNED1Q8TER0 1413 aa21.02■□□□□ 0.96
VMA21-202ENST00000370361 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
VMA21-202ENST00000370361 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
VMA21-202ENST00000370361 ZNF277Q9NRM2 450 aaPredicted RBP21.01■□□□□ 0.95
VMA21-202ENST00000370361 DDNO94850 711 aaPredicted RBP21■□□□□ 0.95
VMA21-202ENST00000370361 PROSER3Q2NL68 480 aa21■□□□□ 0.95
VMA21-202ENST00000370361 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
VMA21-202ENST00000370361 SYNE4Q8N205 404 aa21■□□□□ 0.95
VMA21-202ENST00000370361 VPS33BQ9H267 617 aa21■□□□□ 0.95
VMA21-202ENST00000370361 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
VMA21-202ENST00000370361 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
VMA21-202ENST00000370361 TCIRG1Q13488 830 aa20.99■□□□□ 0.95
VMA21-202ENST00000370361 CHADLQ6NUI6 762 aa20.99■□□□□ 0.95
VMA21-202ENST00000370361 JMYQ8N9B5 988 aa20.99■□□□□ 0.95
VMA21-202ENST00000370361 XAGE3Q8WTP9 111 aa20.99■□□□□ 0.95
VMA21-202ENST00000370361 FZD9O00144 591 aa20.98■□□□□ 0.95
VMA21-202ENST00000370361 PPEF1O14829 653 aaPredicted RBP20.98■□□□□ 0.95
VMA21-202ENST00000370361 LDHDQ86WU2 507 aa20.98■□□□□ 0.95
VMA21-202ENST00000370361 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
VMA21-202ENST00000370361 IFT57Q9NWB7 429 aa20.98■□□□□ 0.95
VMA21-202ENST00000370361 HYPKQ9NX55 129 aa20.98■□□□□ 0.95
VMA21-202ENST00000370361 NLRP10Q86W26 655 aa20.97■□□□□ 0.95
VMA21-202ENST00000370361 GPC2Q8N158 579 aa20.97■□□□□ 0.95
VMA21-202ENST00000370361 GNAI1P63096 354 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 AIMP1Q12904 312 aaKnown RBP20.96■□□□□ 0.95
VMA21-202ENST00000370361 TMC4Q7Z404 712 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 PNMA8AQ86V59 439 aaPredicted RBP20.96■□□□□ 0.95
VMA21-202ENST00000370361 SUPT20HQ8NEM7 779 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 CHPF2Q9P2E5 772 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 HACL1Q9UJ83 578 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 SH3TC1Q8TE82 1336 aa20.96■□□□□ 0.95
VMA21-202ENST00000370361 BBOX1O75936 387 aa20.95■□□□□ 0.94
VMA21-202ENST00000370361 ANXA1P04083 346 aa20.95■□□□□ 0.94
VMA21-202ENST00000370361 ZNF853P0CG23 659 aa20.95■□□□□ 0.94
VMA21-202ENST00000370361 EIF6P56537 245 aaKnown RBP20.95■□□□□ 0.94
VMA21-202ENST00000370361 NECTIN2Q92692 538 aa20.95■□□□□ 0.94
VMA21-202ENST00000370361 TAF1DQ9H5J8 278 aaPredicted RBP20.95■□□□□ 0.94
VMA21-202ENST00000370361 ATP6V0A2Q9Y487 856 aa20.95■□□□□ 0.94
VMA21-202ENST00000370361 DUSP27Q5VZP5 1158 aa20.94■□□□□ 0.94
VMA21-202ENST00000370361 OLFM4Q6UX06 510 aa20.94■□□□□ 0.94
VMA21-202ENST00000370361 ANKRD13DQ6ZTN6 518 aa20.94■□□□□ 0.94
VMA21-202ENST00000370361 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
VMA21-202ENST00000370361 ZNF541Q9H0D2 1346 aa20.94■□□□□ 0.94
VMA21-202ENST00000370361 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
VMA21-202ENST00000370361 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
VMA21-202ENST00000370361 IFFO2Q5TF58 517 aa20.93■□□□□ 0.94
VMA21-202ENST00000370361 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
VMA21-202ENST00000370361 MBIPQ9NS73 344 aa20.93■□□□□ 0.94
VMA21-202ENST00000370361 APAF1O14727 1248 aa20.92■□□□□ 0.94
VMA21-202ENST00000370361 TRIM28Q13263 835 aaKnown RBP20.92■□□□□ 0.94
VMA21-202ENST00000370361 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
VMA21-202ENST00000370361 LARGE2Q8N3Y3 721 aa20.92■□□□□ 0.94
VMA21-202ENST00000370361 ABCC4O15439 1325 aa20.91■□□□□ 0.94
VMA21-202ENST00000370361 EPHX2P34913 555 aa20.91■□□□□ 0.94
VMA21-202ENST00000370361 SP8Q8IXZ3 490 aa20.91■□□□□ 0.94
VMA21-202ENST00000370361 RTFDC1Q9BY42 306 aaPredicted RBP20.91■□□□□ 0.94
VMA21-202ENST00000370361 LMOD1P29536 600 aaPredicted RBP20.9■□□□□ 0.94
VMA21-202ENST00000370361 HTRA3P83110 453 aa20.9■□□□□ 0.94
VMA21-202ENST00000370361 C3orf67Q6ZVT6 689 aa20.9■□□□□ 0.94
VMA21-202ENST00000370361 NIM1KQ8IY84 436 aa20.9■□□□□ 0.94
VMA21-202ENST00000370361 ISCA1Q9BUE6 129 aa20.9■□□□□ 0.94
VMA21-202ENST00000370361 LAMB2P55268 1798 aa20.9■□□□□ 0.94
VMA21-202ENST00000370361 GOLGA2Q08379 1002 aa20.89■□□□□ 0.93
VMA21-202ENST00000370361 GRAPQ13588 217 aa20.89■□□□□ 0.93
VMA21-202ENST00000370361 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
VMA21-202ENST00000370361 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.93
VMA21-202ENST00000370361 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
VMA21-202ENST00000370361 PASKQ96RG2 1323 aa20.87■□□□□ 0.93
VMA21-202ENST00000370361 PPIP5K2O43314 1243 aa20.87■□□□□ 0.93
VMA21-202ENST00000370361 HCLS1P14317 486 aaPredicted RBP20.87■□□□□ 0.93
VMA21-202ENST00000370361 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
VMA21-202ENST00000370361 DPP8Q6V1X1 898 aaPredicted RBP20.87■□□□□ 0.93
VMA21-202ENST00000370361 SF3B3Q15393 1217 aaKnown RBP20.86■□□□□ 0.93
VMA21-202ENST00000370361 EAPPQ56P03 285 aaPredicted RBP20.86■□□□□ 0.93
VMA21-202ENST00000370361 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
VMA21-202ENST00000370361 MPNDQ8N594 471 aa20.86■□□□□ 0.93
VMA21-202ENST00000370361 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
VMA21-202ENST00000370361 DDX58O95786 925 aaKnown RBP20.85■□□□□ 0.93
VMA21-202ENST00000370361 POTEIP0CG38 1075 aa20.85■□□□□ 0.93
VMA21-202ENST00000370361 POTEJP0CG39 1038 aa20.85■□□□□ 0.93
VMA21-202ENST00000370361 RIC3Q7Z5B4 369 aa20.85■□□□□ 0.93
VMA21-202ENST00000370361 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
VMA21-202ENST00000370361 COL4A5P29400 1685 aa20.84■□□□□ 0.93
VMA21-202ENST00000370361 ZNRF3Q9ULT6 936 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms