RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 CAPN2P17655 700 aa20.78■□□□□ 0.92
RTCA-203ENST00000370128 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■■■□□ 14.8
RTCA-203ENST00000370128 PSEN1P49768 467 aa20.78■□□□□ 0.92
RTCA-203ENST00000370128 CLGNO14967 610 aa20.78■□□□□ 0.92
RTCA-203ENST00000370128 GLRX3O76003 335 aaKnown RBP20.78■□□□□ 0.92
RTCA-203ENST00000370128 HYPKQ9NX55 129 aa20.78■□□□□ 0.92
RTCA-203ENST00000370128 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
RTCA-203ENST00000370128 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
RTCA-203ENST00000370128 ERBB3P21860 1342 aa20.77■□□□□ 0.92
RTCA-203ENST00000370128 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
RTCA-203ENST00000370128 OGFRQ9NZT2 677 aa20.77■□□□□ 0.92
RTCA-203ENST00000370128 LMTK3Q96Q04 1460 aa20.77■□□□□ 0.92
RTCA-203ENST00000370128 CWC27Q6UX04 472 aaKnown RBP20.76■□□□□ 0.91
RTCA-203ENST00000370128 TSPYL1Q9H0U9 437 aa20.76■□□□□ 0.91
RTCA-203ENST00000370128 PA2G4Q9UQ80 394 aaKnown RBP20.76■□□□□ 0.91
RTCA-203ENST00000370128 SNX14Q9Y5W7 946 aa20.76■□□□□ 0.91
RTCA-203ENST00000370128 SLFN14P0C7P3 912 aa20.76■□□□□ 0.91
RTCA-203ENST00000370128 LINS1Q8NG48 757 aa20.76■□□□□ 0.91
RTCA-203ENST00000370128 RGPD5Q99666 1765 aa20.76■□□□□ 0.91
RTCA-203ENST00000370128 DDX21Q9NR30 783 aaKnown RBP eCLIP20.75■□□□□ 0.91
RTCA-203ENST00000370128 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
RTCA-203ENST00000370128 PDIA6Q15084 440 aa20.75■□□□□ 0.91
RTCA-203ENST00000370128 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
RTCA-203ENST00000370128 KAZALD1Q96I82 304 aa20.75■□□□□ 0.91
RTCA-203ENST00000370128 RBM27Q9P2N5 1060 aaKnown RBP20.75■□□□□ 0.91
RTCA-203ENST00000370128 KCNG1Q9UIX4 513 aa20.75■□□□□ 0.91
RTCA-203ENST00000370128 ECHDC1Q9NTX5 307 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 GEMIN8Q9NWZ8 242 aaKnown RBP20.74■□□□□ 0.91
RTCA-203ENST00000370128 NSFL1CQ9UNZ2 370 aaKnown RBP20.74■□□□□ 0.91
RTCA-203ENST00000370128 GRM8O00222 908 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 ZC3H6P61129 1189 aaKnown RBP20.74■□□□□ 0.91
RTCA-203ENST00000370128 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
RTCA-203ENST00000370128 ERC1Q8IUD2 1116 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 ANKRD7Q92527 254 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 TTC14Q96N46 770 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 SPG7Q9UQ90 795 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 UTYO14607 1347 aa20.74■□□□□ 0.91
RTCA-203ENST00000370128 FAM177BA6PVY3 158 aa20.73■□□□□ 0.91
RTCA-203ENST00000370128 MST1RQ04912 1400 aa20.73■□□□□ 0.91
RTCA-203ENST00000370128 SUCLG2Q96I99 432 aa20.73■□□□□ 0.91
RTCA-203ENST00000370128 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
RTCA-203ENST00000370128 DDX58O95786 925 aaKnown RBP20.72■□□□□ 0.91
RTCA-203ENST00000370128 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
RTCA-203ENST00000370128 KIF1AQ12756 1690 aa20.72■□□□□ 0.91
RTCA-203ENST00000370128 PRIM1P49642 420 aaKnown RBP20.72■□□□□ 0.91
RTCA-203ENST00000370128 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
RTCA-203ENST00000370128 IFIT2P09913 472 aaKnown RBP20.71■□□□□ 0.91
RTCA-203ENST00000370128 SLC39A6Q13433 755 aa20.71■□□□□ 0.91
RTCA-203ENST00000370128 BICC1Q9H694 974 aaKnown RBP20.71■□□□□ 0.91
RTCA-203ENST00000370128 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
RTCA-203ENST00000370128 C19orf44Q9H6X5 657 aa20.71■□□□□ 0.91
RTCA-203ENST00000370128 CALCOCO1Q9P1Z2 691 aa20.71■□□□□ 0.91
RTCA-203ENST00000370128 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
RTCA-203ENST00000370128 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.7■□□□□ 0.9
RTCA-203ENST00000370128 ALS2Q96Q42 1657 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 NPHP3Q7Z494 1330 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 SASH1O94885 1247 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 MBD3O95983 291 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 IGKV5-2P06315 115 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 AACSQ86V21 672 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 RUFY2Q8WXA3 655 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 SLC52A2Q9HAB3 445 aa20.7■□□□□ 0.9
RTCA-203ENST00000370128 AK2P54819 239 aa20.69■□□□□ 0.9
RTCA-203ENST00000370128 PTH1RQ03431 593 aa20.69■□□□□ 0.9
RTCA-203ENST00000370128 CNPY4Q8N129 248 aa20.69■□□□□ 0.9
RTCA-203ENST00000370128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.69■□□□□ 0.95e-6■■□□□ 11.7
RTCA-203ENST00000370128 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
RTCA-203ENST00000370128 NLRP2Q9NX02 1062 aa20.68■□□□□ 0.9
RTCA-203ENST00000370128 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
RTCA-203ENST00000370128 AXDND1Q5T1B0 1012 aaPredicted RBP20.68■□□□□ 0.9
RTCA-203ENST00000370128 EAF2Q96CJ1 260 aaPredicted RBP20.68■□□□□ 0.9
RTCA-203ENST00000370128 EVI5LQ96CN4 794 aa20.68■□□□□ 0.9
RTCA-203ENST00000370128 C5P01031 1676 aa20.68■□□□□ 0.9
RTCA-203ENST00000370128 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 PHKG2P15735 406 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 LIMCH1Q9UPQ0 1083 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
RTCA-203ENST00000370128 SYCE3A1L190 88 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 APPP05067 770 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 LRSAM1Q6UWE0 723 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 ZBTB9Q96C00 473 aa20.67■□□□□ 0.9
RTCA-203ENST00000370128 MYCNP04198 464 aaPredicted RBP20.66■□□□□ 0.9
RTCA-203ENST00000370128 CASTP20810 708 aaKnown RBP20.66■□□□□ 0.9
RTCA-203ENST00000370128 G3BP1Q13283 466 aaKnown RBP eCLIP20.66■□□□□ 0.9
RTCA-203ENST00000370128 LARP1Q6PKG0 1096 aaKnown RBP20.66■□□□□ 0.9
RTCA-203ENST00000370128 CHMP4CQ96CF2 233 aa20.66■□□□□ 0.9
RTCA-203ENST00000370128 LARP6Q9BRS8 491 aaKnown RBP20.66■□□□□ 0.9
RTCA-203ENST00000370128 EFCC1Q9HA90 598 aa20.66■□□□□ 0.9
RTCA-203ENST00000370128 MYL6BP14649 208 aa20.66■□□□□ 0.9
RTCA-203ENST00000370128 CPA1P15085 419 aa20.66■□□□□ 0.9
RTCA-203ENST00000370128 MEGF6O75095 1541 aa20.65■□□□□ 0.9
RTCA-203ENST00000370128 NOLC1Q14978 699 aaKnown RBP eCLIP20.65■□□□□ 0.9
RTCA-203ENST00000370128 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
RTCA-203ENST00000370128 TATP17735 454 aaPredicted RBP20.65■□□□□ 0.9
RTCA-203ENST00000370128 TERF2Q15554 542 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms