RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
SSR4-204ENST00000370087 EPS15P42566 896 aa20.59■□□□□ 0.89
SSR4-204ENST00000370087 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
SSR4-204ENST00000370087 UBN2Q6ZU65 1347 aa20.58■□□□□ 0.89
SSR4-204ENST00000370087 TRAF5O00463 557 aa20.58■□□□□ 0.89
SSR4-204ENST00000370087 NGEFQ8N5V2 710 aa20.58■□□□□ 0.89
SSR4-204ENST00000370087 RTF1Q92541 710 aaKnown RBP20.58■□□□□ 0.89
SSR4-204ENST00000370087 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
SSR4-204ENST00000370087 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
SSR4-204ENST00000370087 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSR4-204ENST00000370087 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
SSR4-204ENST00000370087 CYP4F22Q6NT55 531 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 TTLL7Q6ZT98 887 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 LAMB2P55268 1798 aa20.57■□□□□ 0.88
SSR4-204ENST00000370087 SLC34A2O95436 690 aa20.56■□□□□ 0.88
SSR4-204ENST00000370087 EIF6P56537 245 aaKnown RBP20.56■□□□□ 0.88
SSR4-204ENST00000370087 CST9Q5W186 159 aa20.56■□□□□ 0.88
SSR4-204ENST00000370087 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
SSR4-204ENST00000370087 GPTP24298 496 aa20.55■□□□□ 0.88
SSR4-204ENST00000370087 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
SSR4-204ENST00000370087 GRM1Q13255 1194 aa20.55■□□□□ 0.88
SSR4-204ENST00000370087 MAP3K15Q6ZN16 1313 aa20.54■□□□□ 0.88
SSR4-204ENST00000370087 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
SSR4-204ENST00000370087 LMOD1P29536 600 aaPredicted RBP20.54■□□□□ 0.88
SSR4-204ENST00000370087 PAXIP1Q6ZW49 1069 aaPredicted RBP20.54■□□□□ 0.88
SSR4-204ENST00000370087 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
SSR4-204ENST00000370087 NYXQ9GZU5 481 aa20.54■□□□□ 0.88
SSR4-204ENST00000370087 TSKSQ9UJT2 592 aa20.54■□□□□ 0.88
SSR4-204ENST00000370087 IBTKQ9P2D0 1353 aaPredicted RBP20.54■□□□□ 0.88
SSR4-204ENST00000370087 AOC2O75106 756 aa20.53■□□□□ 0.88
SSR4-204ENST00000370087 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
SSR4-204ENST00000370087 SUSD4Q5VX71 490 aa20.53■□□□□ 0.88
SSR4-204ENST00000370087 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
SSR4-204ENST00000370087 ERVV-1B6SEH8 477 aa20.52■□□□□ 0.88
SSR4-204ENST00000370087 PPEF1O14829 653 aaPredicted RBP20.52■□□□□ 0.88
SSR4-204ENST00000370087 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
SSR4-204ENST00000370087 CC2D2BQ6DHV5 1058 aa20.52■□□□□ 0.88
SSR4-204ENST00000370087 ZBTB3Q9H5J0 574 aa20.52■□□□□ 0.88
SSR4-204ENST00000370087 NUDCQ9Y266 331 aa20.52■□□□□ 0.88
SSR4-204ENST00000370087 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
SSR4-204ENST00000370087 NTSR2O95665 410 aa20.51■□□□□ 0.87
SSR4-204ENST00000370087 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
SSR4-204ENST00000370087 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
SSR4-204ENST00000370087 TLL2Q9Y6L7 1015 aa20.51■□□□□ 0.87
SSR4-204ENST00000370087 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
SSR4-204ENST00000370087 MYL6BP14649 208 aa20.5■□□□□ 0.87
SSR4-204ENST00000370087 AOC3Q16853 763 aa20.5■□□□□ 0.87
SSR4-204ENST00000370087 USP50Q70EL3 339 aaPredicted RBP20.5■□□□□ 0.87
SSR4-204ENST00000370087 TAF1P21675 1872 aa20.5■□□□□ 0.87
SSR4-204ENST00000370087 CCDC85CA6NKD9 419 aa20.49■□□□□ 0.87
SSR4-204ENST00000370087 KIF6Q6ZMV9 814 aa20.49■□□□□ 0.87
SSR4-204ENST00000370087 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
SSR4-204ENST00000370087 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
SSR4-204ENST00000370087 CRAMP1Q96RY5 1269 aa20.49■□□□□ 0.87
SSR4-204ENST00000370087 CASP8AP2Q9UKL3 1982 aa20.48■□□□□ 0.87
SSR4-204ENST00000370087 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
SSR4-204ENST00000370087 ECE1P42892 770 aa20.48■□□□□ 0.87
SSR4-204ENST00000370087 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
SSR4-204ENST00000370087 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
SSR4-204ENST00000370087 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
SSR4-204ENST00000370087 GPRC5DQ9NZD1 345 aa20.48■□□□□ 0.87
SSR4-204ENST00000370087 TNRC18O15417 2968 aaPredicted RBP20.47■□□□□ 0.87
SSR4-204ENST00000370087 CXCL9Q07325 125 aa20.46■□□□□ 0.87
SSR4-204ENST00000370087 GLIS2Q9BZE0 524 aaPredicted RBP20.46■□□□□ 0.87
SSR4-204ENST00000370087 ADARB2Q9NS39 739 aaKnown RBP20.46■□□□□ 0.87
SSR4-204ENST00000370087 ABCC4O15439 1325 aa20.46■□□□□ 0.87
SSR4-204ENST00000370087 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
SSR4-204ENST00000370087 GMPSP49915 693 aaPredicted RBP20.45■□□□□ 0.86
SSR4-204ENST00000370087 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
SSR4-204ENST00000370087 BEGAINQ9BUH8 593 aa20.45■□□□□ 0.86
SSR4-204ENST00000370087 CELF2O95319 508 aaKnown RBP20.44■□□□□ 0.86
SSR4-204ENST00000370087 RGS19P49795 217 aa20.44■□□□□ 0.86
SSR4-204ENST00000370087 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
SSR4-204ENST00000370087 SAPCD2Q86UD0 394 aa20.44■□□□□ 0.86
SSR4-204ENST00000370087 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
SSR4-204ENST00000370087 LRRC37AA6NMS7 1700 aa20.44■□□□□ 0.86
SSR4-204ENST00000370087 SHTN1A0MZ66 631 aa20.43■□□□□ 0.86
SSR4-204ENST00000370087 MLLT1Q03111 559 aaPredicted RBP20.43■□□□□ 0.86
SSR4-204ENST00000370087 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
SSR4-204ENST00000370087 MAP2K2P36507 400 aa20.42■□□□□ 0.86
SSR4-204ENST00000370087 HIRAP54198 1017 aaPredicted RBP20.42■□□□□ 0.86
SSR4-204ENST00000370087 TRPM4Q8TD43 1214 aa20.42■□□□□ 0.86
SSR4-204ENST00000370087 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
SSR4-204ENST00000370087 MCOLN1Q9GZU1 580 aa20.42■□□□□ 0.86
SSR4-204ENST00000370087 ZNRF3Q9ULT6 936 aa20.42■□□□□ 0.86
SSR4-204ENST00000370087 COL4A1P02462 1669 aa20.42■□□□□ 0.86
SSR4-204ENST00000370087 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
SSR4-204ENST00000370087 PROSER3Q2NL68 480 aa20.41■□□□□ 0.86
SSR4-204ENST00000370087 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
SSR4-204ENST00000370087 PLEKHF1Q96S99 279 aa20.41■□□□□ 0.86
SSR4-204ENST00000370087 ANXA1P04083 346 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 PDIA6Q15084 440 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 ZIC5Q96T25 663 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 ZNF408Q9H9D4 720 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
SSR4-204ENST00000370087 RAD17O75943 681 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms