RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-203ENST00000370025 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 DDB1Q16531 1140 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 ITGB4P16144 1822 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 KAZALD1Q96I82 304 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 A0A087WZG4 1122 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 NUTM1Q86Y26 1132 aa12.1□□□□□ -0.47
PRPF38B-203ENST00000370025 LRP6O75581 1613 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 OFD1O75665 1012 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 CBX1P83916 185 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 BCL9O00512 1426 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 NRAPQ86VF7 1730 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
PRPF38B-203ENST00000370025 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 CWC25Q9NXE8 425 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 REC8O95072 547 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 SSFA2P28290 1259 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 RNF214Q8ND24 703 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.48
PRPF38B-203ENST00000370025 CCDC173Q0VFZ6 552 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 COL15A1P39059 1388 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 ERC2O15083 957 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
PRPF38B-203ENST00000370025 SLIT2O94813 1529 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 A0A0G2JS52 829 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 VGLL3A8MV65 326 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 H7C1W4 665 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 JCADQ9P266 1359 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 UNC5CLQ8IV45 518 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
PRPF38B-203ENST00000370025 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 MCTP1Q6DN14 999 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 SIL1Q9H173 461 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 NUP188Q5SRE5 1749 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 CASP7P55210 303 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 TCIRG1Q13488 830 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 AACSQ86V21 672 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 PI4K2BQ8TCG2 481 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
PRPF38B-203ENST00000370025 CNTROBQ8N137 903 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 SASH1O94885 1247 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 CYP19A1P11511 503 aaPredicted RBP12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 SNX21Q969T3 373 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 CHMLP26374 656 aa12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 MARCH10Q8NA82 808 aaPredicted RBP12.04□□□□□ -0.48
PRPF38B-203ENST00000370025 DOT1LQ8TEK3 1739 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 KLHDC4Q8TBB5 520 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
PRPF38B-203ENST00000370025 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.48
PRPF38B-203ENST00000370025 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.48
PRPF38B-203ENST00000370025 KIF2CQ99661 725 aa12.02□□□□□ -0.48
PRPF38B-203ENST00000370025 MAP3K15Q6ZN16 1313 aa12.02□□□□□ -0.48
PRPF38B-203ENST00000370025 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
PRPF38B-203ENST00000370025 PTPN12Q05209 780 aaKnown RBP12.02□□□□□ -0.49
PRPF38B-203ENST00000370025 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms