RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
SFR1-201ENST00000369727 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
SFR1-201ENST00000369727 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
SFR1-201ENST00000369727 ITSN1Q15811 1721 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 RXRBP28702 533 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 PTK2Q05397 1052 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 LCE2CQ5TA81 110 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 CCDC116Q8IYX3 515 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 SLC10A4Q96EP9 437 aa10.69□□□□□ -0.7
SFR1-201ENST00000369727 CDK12Q9NYV4 1490 aaPredicted RBP10.69□□□□□ -0.7
SFR1-201ENST00000369727 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 C6orf118Q5T5N4 469 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
SFR1-201ENST00000369727 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
SFR1-201ENST00000369727 ARHGEF10O15013 1369 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 GPRASP1Q5JY77 1395 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
SFR1-201ENST00000369727 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 ATP7BP35670 1465 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 SOBPA7XYQ1 873 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 RBM6P78332 1123 aaKnown RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 MEIOBQ8N635 442 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
SFR1-201ENST00000369727 CDK19Q9BWU1 502 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 USP21Q9UK80 565 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 GPSM3Q9Y4H4 160 aa10.67□□□□□ -0.7
SFR1-201ENST00000369727 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
SFR1-201ENST00000369727 PPP1R26Q5T8A7 1209 aaPredicted RBP10.66□□□□□ -0.7
SFR1-201ENST00000369727 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
SFR1-201ENST00000369727 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
SFR1-201ENST00000369727 TRPC5Q9UL62 973 aaPredicted RBP10.66□□□□□ -0.7
SFR1-201ENST00000369727 TOPAZ1Q8N9V7 1692 aa10.65□□□□□ -0.7
SFR1-201ENST00000369727 UPP2O95045 317 aa10.65□□□□□ -0.7
SFR1-201ENST00000369727 BMP2P12643 396 aa10.65□□□□□ -0.7
SFR1-201ENST00000369727 VEGFBP49765 207 aa10.65□□□□□ -0.7
SFR1-201ENST00000369727 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
SFR1-201ENST00000369727 NGDNQ8NEJ9 315 aaKnown RBP10.65□□□□□ -0.7
SFR1-201ENST00000369727 ALS2Q96Q42 1657 aa10.65□□□□□ -0.71
SFR1-201ENST00000369727 QRICH2Q9H0J4 1663 aa10.65□□□□□ -0.71
SFR1-201ENST00000369727 ABCA3Q99758 1704 aa10.64□□□□□ -0.71
SFR1-201ENST00000369727 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
SFR1-201ENST00000369727 SLC16A10Q8TF71 515 aa10.64□□□□□ -0.71
SFR1-201ENST00000369727 TRIM34Q9BYJ4 488 aa10.64□□□□□ -0.71
SFR1-201ENST00000369727 ROCK2O75116 1388 aaKnown RBP10.64□□□□□ -0.71
SFR1-201ENST00000369727 BCL9LQ86UU0 1499 aa10.63□□□□□ -0.71
SFR1-201ENST00000369727 ATRNO75882 1429 aa10.63□□□□□ -0.71
SFR1-201ENST00000369727 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
SFR1-201ENST00000369727 TONSLQ96HA7 1378 aa10.63□□□□□ -0.71
SFR1-201ENST00000369727 SLIT2O94813 1529 aa10.62□□□□□ -0.71
SFR1-201ENST00000369727 WIPF1O43516 503 aa10.62□□□□□ -0.71
SFR1-201ENST00000369727 PGPEP1Q9NXJ5 209 aa10.62□□□□□ -0.71
SFR1-201ENST00000369727 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 SRPK2P78362 688 aaKnown RBP10.61□□□□□ -0.71
SFR1-201ENST00000369727 CBLBQ13191 982 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 NBPF8Q3BBV2 869 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 INTS6LQ5JSJ4 861 aaKnown RBP10.61□□□□□ -0.71
SFR1-201ENST00000369727 NPAS3Q8IXF0 933 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
SFR1-201ENST00000369727 RGS12O14924 1447 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 ACEP12821 1306 aa10.61□□□□□ -0.71
SFR1-201ENST00000369727 MAN1A2O60476 641 aa10.6□□□□□ -0.71
SFR1-201ENST00000369727 UNC5CLQ8IV45 518 aa10.6□□□□□ -0.71
SFR1-201ENST00000369727 CRYBG1Q9Y4K1 1723 aa10.6□□□□□ -0.71
SFR1-201ENST00000369727 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
SFR1-201ENST00000369727 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
SFR1-201ENST00000369727 BRD4O60885 1362 aaPredicted RBP10.59□□□□□ -0.71
SFR1-201ENST00000369727 H3BM21 787 aa10.59□□□□□ -0.71
SFR1-201ENST00000369727 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
SFR1-201ENST00000369727 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
SFR1-201ENST00000369727 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
SFR1-201ENST00000369727 SBNO2Q9Y2G9 1366 aa10.59□□□□□ -0.71
SFR1-201ENST00000369727 DHX9Q08211 1270 aaKnown RBP10.58□□□□□ -0.72
SFR1-201ENST00000369727 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
SFR1-201ENST00000369727 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
SFR1-201ENST00000369727 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 RAB15P59190 212 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 Q6ZVU0 165 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 IRF7Q92985 503 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 CARD11Q9BXL7 1154 aa10.58□□□□□ -0.72
SFR1-201ENST00000369727 VPS72Q15906 364 aa10.57□□□□□ -0.72
SFR1-201ENST00000369727 GLI3P10071 1580 aa10.56□□□□□ -0.72
SFR1-201ENST00000369727 PHRF1Q9P1Y6 1649 aaKnown RBP10.56□□□□□ -0.72
SFR1-201ENST00000369727 GMPRP36959 345 aa10.56□□□□□ -0.72
SFR1-201ENST00000369727 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
SFR1-201ENST00000369727 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
SFR1-201ENST00000369727 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
SFR1-201ENST00000369727 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
SFR1-201ENST00000369727 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
SFR1-201ENST00000369727 TMPRSS4Q9NRS4 437 aa10.55□□□□□ -0.72
SFR1-201ENST00000369727 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
SFR1-201ENST00000369727 USP6P35125 1406 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms