RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 NOP58Q9Y2X3 529 aaKnown RBP17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
HMGCS2-201ENST00000369406 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
HMGCS2-201ENST00000369406 TTC22Q5TAA0 569 aa17.47■□□□□ 0.39
HMGCS2-201ENST00000369406 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
HMGCS2-201ENST00000369406 CASZ1Q86V15 1759 aa17.46■□□□□ 0.39
HMGCS2-201ENST00000369406 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.38
HMGCS2-201ENST00000369406 SIL1Q9H173 461 aa17.46■□□□□ 0.38
HMGCS2-201ENST00000369406 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 SASH1O94885 1247 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 PDE1AP54750 535 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
HMGCS2-201ENST00000369406 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
HMGCS2-201ENST00000369406 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
HMGCS2-201ENST00000369406 PTPN12Q05209 780 aaKnown RBP17.43■□□□□ 0.38
HMGCS2-201ENST00000369406 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 ZNF34Q8IZ26 560 aa17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 ZBTB47Q9UFB7 747 aaPredicted RBP17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 ERVV-1B6SEH8 477 aa17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
HMGCS2-201ENST00000369406 CNTNAP4Q9C0A0 1308 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 MX1P20591 662 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 OSBPL3Q9H4L5 887 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 HDAC5Q9UQL6 1122 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 SDSP20132 328 aa17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
HMGCS2-201ENST00000369406 UBR3Q6ZT12 1888 aa17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 BCL11BQ9C0K0 894 aaPredicted RBP17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 LAMB2P55268 1798 aa17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 MSH5O43196 834 aa17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
HMGCS2-201ENST00000369406 COL4A1P02462 1669 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 TRIM37O94972 964 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 SUSD4Q5VX71 490 aa17.39■□□□□ 0.37
HMGCS2-201ENST00000369406 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 BCL2L12Q9HB09 334 aa17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 TAF1P21675 1872 aa17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
HMGCS2-201ENST00000369406 HSP90AB4PQ58FF6 505 aa17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
HMGCS2-201ENST00000369406 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 COL24A1Q17RW2 1714 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 GNPATO15228 680 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 FAM196AQ6ZSG2 479 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 PLA2G12BQ9BX93 195 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 MAP4K4O95819 1239 aaPredicted RBP17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 TFCP2Q12800 502 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 LRRC24Q50LG9 513 aa17.36■□□□□ 0.37
HMGCS2-201ENST00000369406 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 POTEAQ6S8J7 498 aa17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 AACSQ86V21 672 aa17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 CSF1RP07333 972 aa17.35■□□□□ 0.37
HMGCS2-201ENST00000369406 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
HMGCS2-201ENST00000369406 CDC45O75419 566 aa17.34■□□□□ 0.37
HMGCS2-201ENST00000369406 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
HMGCS2-201ENST00000369406 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMGCS2-201ENST00000369406 NTSR2O95665 410 aa17.33■□□□□ 0.37
HMGCS2-201ENST00000369406 PROM2Q8N271 834 aa17.33■□□□□ 0.37
HMGCS2-201ENST00000369406 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.37
HMGCS2-201ENST00000369406 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.37
HMGCS2-201ENST00000369406 GREM2Q9H772 168 aa17.33■□□□□ 0.37
HMGCS2-201ENST00000369406 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
HMGCS2-201ENST00000369406 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
HMGCS2-201ENST00000369406 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.36
HMGCS2-201ENST00000369406 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms