RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
VPS45-202ENST00000369130 ARID5BQ14865 1188 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 ANO6Q4KMQ2 910 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
VPS45-202ENST00000369130 GUCY1B3Q02153 619 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 CCDC186Q7Z3E2 898 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
VPS45-202ENST00000369130 NR1I2O75469 434 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 CHST3Q7LGC8 479 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
VPS45-202ENST00000369130 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
VPS45-202ENST00000369130 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 CCDC171Q6TFL3 1326 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 SLC27A2O14975 620 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
VPS45-202ENST00000369130 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
VPS45-202ENST00000369130 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.542e-6■□□□□ 10.1
VPS45-202ENST00000369130 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 KAZALD1Q96I82 304 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS45-202ENST00000369130 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
VPS45-202ENST00000369130 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
VPS45-202ENST00000369130 TYRO3Q06418 890 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 ESCO1Q5FWF5 840 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 NUP62CLQ9H1M0 184 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 MRVI1Q9Y6F6 885 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
VPS45-202ENST00000369130 CCDC192P0DO97 292 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 TERF1P54274 439 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS45-202ENST00000369130 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 RAB11FIP4Q86YS3 637 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 KIF3AQ9Y496 699 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 NPHP1O15259 732 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 TMEM87AQ8NBN3 555 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 CBX8Q9HC52 389 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 PRDM4Q9UKN5 801 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 ATP6V1DQ9Y5K8 247 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
VPS45-202ENST00000369130 KRT85P78386 507 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 MAP3K11Q16584 847 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
VPS45-202ENST00000369130 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
VPS45-202ENST00000369130 TECPR2O15040 1411 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 CCT2P78371 535 aaKnown RBP11.66□□□□□ -0.54
VPS45-202ENST00000369130 FGD1P98174 961 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 PSME1Q06323 249 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 TOB2Q14106 344 aaPredicted RBP11.66□□□□□ -0.54
VPS45-202ENST00000369130 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
VPS45-202ENST00000369130 EVI5LQ96CN4 794 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.54
VPS45-202ENST00000369130 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
VPS45-202ENST00000369130 AOX1Q06278 1338 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 PIK3C2AO00443 1686 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
VPS45-202ENST00000369130 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 CCDC144CPQ8IYA2 1237 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 BRF1Q92994 677 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 MYD88Q99836 296 aa11.65□□□□□ -0.54
VPS45-202ENST00000369130 CCDC94Q9BW85 323 aaPredicted RBP11.65□□□□□ -0.54
VPS45-202ENST00000369130 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
VPS45-202ENST00000369130 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
VPS45-202ENST00000369130 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
VPS45-202ENST00000369130 GRM8O00222 908 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 GIGYF1O75420 1035 aaPredicted RBP11.64□□□□□ -0.55
VPS45-202ENST00000369130 C1orf141Q5JVX7 400 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 Q6ZUG5 572 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
VPS45-202ENST00000369130 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 H3BQV1 296 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 PTPN21Q16825 1174 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 HSP90AB4PQ58FF6 505 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 FILIP1Q7Z7B0 1213 aa11.63□□□□□ -0.55
VPS45-202ENST00000369130 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms