RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ANO6Q4KMQ2 910 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 WHAMMQ8TF30 809 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 SMIM24O75264 130 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 LRRFIP1Q32MZ4 808 aaKnown RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 DUSP27Q5VZP5 1158 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 TTC19Q6DKK2 380 aaPredicted RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 PSEN1P49768 467 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 BRD3Q15059 726 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 CEP104O60308 925 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 FILIP1LQ4L180 1135 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
PRDM1-201ENST00000369089 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 GIGYF2Q6Y7W6 1299 aaKnown RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 BSDC1Q9NW68 430 aaPredicted RBP11.98□□□□□ -0.49
PRDM1-201ENST00000369089 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 STX1AQ16623 288 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 CEP128Q6ZU80 1094 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 CLCN6P51797 869 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 SH3BGRP55822 239 aaPredicted RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 LARP1BQ659C4 914 aaKnown RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 ISM2Q6H9L7 571 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 PFDN1O60925 122 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 LUC7L3O95232 432 aaKnown RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 GCFC2P16383 781 aaKnown RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
PRDM1-201ENST00000369089 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 VCXQ9H320 206 aa11.97□□□□□ -0.49
PRDM1-201ENST00000369089 TULP2O00295 520 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 HSF2BPO75031 334 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 TYRO3Q06418 890 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 ZEB2O60315 1214 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 MXRA7P84157 204 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 ZNF365Q70YC5 407 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 GPATCH3Q96I76 525 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 KIF2CQ99661 725 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
PRDM1-201ENST00000369089 RPSAP08865 295 aaKnown RBP11.96□□□□□ -0.49
PRDM1-201ENST00000369089 PCK1P35558 622 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 ZSCAN25Q6NSZ9 544 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 ADAM21Q9UKJ8 722 aa11.96□□□□□ -0.49
PRDM1-201ENST00000369089 FAM71BQ8TC56 605 aa11.96□□□□□ -0.5
PRDM1-201ENST00000369089 PTPRKQ15262 1439 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 EFCAB8A8MWE9 144 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 ARMC9Q7Z3E5 817 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 ZNF396Q96N95 335 aaPredicted RBP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 CREB3O43889 395 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 ETAA1Q9NY74 926 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 LRRD1A4D1F6 860 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 CAND2O75155 1236 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 CNNM3Q8NE01 707 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 KIF14Q15058 1648 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 DESP17661 470 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 CCT5P48643 541 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 ZNF75DP51815 510 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
PRDM1-201ENST00000369089 GOLGA6AQ9NYA3 693 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
PRDM1-201ENST00000369089 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
PRDM1-201ENST00000369089 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 BAIAP2L1Q9UHR4 511 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
PRDM1-201ENST00000369089 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 PRPF38AQ8NAV1 312 aaKnown RBP11.94□□□□□ -0.5
PRDM1-201ENST00000369089 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 SPDL1Q96EA4 605 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 IFFO1Q0D2I5 559 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
PRDM1-201ENST00000369089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRDM1-201ENST00000369089 ZFYP08048 801 aaPredicted RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 ERBINQ96RT1 1412 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 ARFGAP2Q8N6H7 521 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 ANKS4BQ8N8V4 417 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 FBF1Q8TES7 1133 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 TBC1D22AQ8WUA7 517 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 ANKRD65E5RJM6 399 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 NOP2P46087 812 aaKnown RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms