RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 POU5F1BQ06416 359 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 SLC20A2Q08357 652 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
SCNM1-202ENST00000368905 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-202ENST00000368905 COL3A1P02461 1466 aaPredicted RBP12.01□□□□□ -0.49
SCNM1-202ENST00000368905 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
SCNM1-202ENST00000368905 PSMD2Q13200 908 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 UBE4AQ14139 1066 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 MUC3BQ9H195 1237 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 AKAP2Q9Y2D5 859 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
SCNM1-202ENST00000368905 RARSP54136 660 aaKnown RBP12□□□□□ -0.49
SCNM1-202ENST00000368905 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
SCNM1-202ENST00000368905 JDP2Q8WYK2 163 aa12□□□□□ -0.49
SCNM1-202ENST00000368905 FAM210AQ96ND0 272 aa12□□□□□ -0.49
SCNM1-202ENST00000368905 DDX56Q9NY93 547 aaKnown RBP12□□□□□ -0.49
SCNM1-202ENST00000368905 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
SCNM1-202ENST00000368905 IQSEC3Q9UPP2 1182 aaPredicted RBP12□□□□□ -0.49
SCNM1-202ENST00000368905 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
SCNM1-202ENST00000368905 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 POM121CA8CG34 1229 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 FCHSD2O94868 740 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 TGFB3P10600 412 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 TSNAXIP1Q2TAA8 658 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 MAP9Q49MG5 647 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 CCDC92Q53HC0 331 aaPredicted RBP11.99□□□□□ -0.49
SCNM1-202ENST00000368905 UBR1Q8IWV7 1749 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 CPS1P31327 1500 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 IGHDP01880 384 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 FAM163BP0C2L3 166 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 PDE6BP35913 854 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
SCNM1-202ENST00000368905 CDC42BPGQ6DT37 1551 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 SVIPQ8NHG7 77 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 PIK3R5Q8WYR1 880 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
SCNM1-202ENST00000368905 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
SCNM1-202ENST00000368905 MKRN1Q9UHC7 482 aaKnown RBP11.99□□□□□ -0.49
SCNM1-202ENST00000368905 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
SCNM1-202ENST00000368905 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 HIP1RO75146 1068 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 USP5P45974 858 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 VPS37AQ8NEZ2 397 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 FGAP02671 866 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 GTF2F1P35269 517 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 MAPRE1Q15691 268 aaKnown RBP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 DNTTIP2Q5QJE6 756 aaKnown RBP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 FILIP1Q7Z7B0 1213 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 RETREG1Q9H6L5 497 aa11.98□□□□□ -0.49
SCNM1-202ENST00000368905 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
SCNM1-202ENST00000368905 METP08581 1390 aa11.97□□□□□ -0.49
SCNM1-202ENST00000368905 LDHAP00338 332 aaKnown RBP11.97□□□□□ -0.49
SCNM1-202ENST00000368905 NAT1P18440 290 aa11.97□□□□□ -0.49
SCNM1-202ENST00000368905 LARP1BQ659C4 914 aaKnown RBP11.97□□□□□ -0.49
SCNM1-202ENST00000368905 JAZF1Q86VZ6 243 aa11.97□□□□□ -0.49
SCNM1-202ENST00000368905 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
SCNM1-202ENST00000368905 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
SCNM1-202ENST00000368905 DMGDHQ9UI17 866 aaKnown RBP11.97□□□□□ -0.49
SCNM1-202ENST00000368905 PES1O00541 588 aaKnown RBP11.96□□□□□ -0.49
SCNM1-202ENST00000368905 ATICP31939 592 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 AMHR2Q16671 573 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 C1QTNF12Q5T7M4 302 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 UTP14CQ5TAP6 766 aaKnown RBP11.96□□□□□ -0.49
SCNM1-202ENST00000368905 ACRBPQ8NEB7 543 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
SCNM1-202ENST00000368905 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.49
SCNM1-202ENST00000368905 CASS4Q9NQ75 786 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
SCNM1-202ENST00000368905 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.5
SCNM1-202ENST00000368905 HMGN5P82970 282 aaKnown RBP11.96□□□□□ -0.5
SCNM1-202ENST00000368905 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.5
SCNM1-202ENST00000368905 CCDC47Q96A33 483 aaKnown RBP11.96□□□□□ -0.5
SCNM1-202ENST00000368905 EID1Q9Y6B2 187 aa11.96□□□□□ -0.5
SCNM1-202ENST00000368905 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
SCNM1-202ENST00000368905 SMAP1Q8IYB5 467 aaPredicted RBP11.95□□□□□ -0.5
SCNM1-202ENST00000368905 COG3Q96JB2 828 aa11.95□□□□□ -0.5
SCNM1-202ENST00000368905 MPHOSPH6Q99547 160 aaKnown RBP11.95□□□□□ -0.5
SCNM1-202ENST00000368905 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
SCNM1-202ENST00000368905 CASQ1P31415 396 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 RIPK4P57078 832 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-202ENST00000368905 PAF1Q8N7H5 531 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
SCNM1-202ENST00000368905 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
SCNM1-202ENST00000368905 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
SCNM1-202ENST00000368905 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-202ENST00000368905 COQ9O75208 318 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms