RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
TPM3-211ENST00000368531 NRXN2Q9P2S2 1712 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 TRIM27P14373 513 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 BEND3Q5T5X7 828 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
TPM3-211ENST00000368531 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
TPM3-211ENST00000368531 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
TPM3-211ENST00000368531 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
TPM3-211ENST00000368531 CCDC191Q8NCU4 936 aa17.61■□□□□ 0.41
TPM3-211ENST00000368531 SRCIN1Q9C0H9 1055 aa17.61■□□□□ 0.41
TPM3-211ENST00000368531 NTSR2O95665 410 aa17.6■□□□□ 0.41
TPM3-211ENST00000368531 ST5P78524 1137 aa17.6■□□□□ 0.41
TPM3-211ENST00000368531 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
TPM3-211ENST00000368531 LRP5O75197 1615 aa17.6■□□□□ 0.41
TPM3-211ENST00000368531 ANKRD31Q8N7Z5 1873 aa17.59■□□□□ 0.41
TPM3-211ENST00000368531 SH3TC1Q8TE82 1336 aa17.58■□□□□ 0.4
TPM3-211ENST00000368531 ALDH1L1O75891 902 aa17.58■□□□□ 0.4
TPM3-211ENST00000368531 GCKRQ14397 625 aa17.58■□□□□ 0.4
TPM3-211ENST00000368531 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
TPM3-211ENST00000368531 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.4
TPM3-211ENST00000368531 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
TPM3-211ENST00000368531 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 UBE3BQ7Z3V4 1068 aa17.57■□□□□ 0.4
TPM3-211ENST00000368531 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
TPM3-211ENST00000368531 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 ZBTB38Q8NAP3 1195 aaPredicted RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
TPM3-211ENST00000368531 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
TPM3-211ENST00000368531 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
TPM3-211ENST00000368531 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
TPM3-211ENST00000368531 ABCC4O15439 1325 aa17.56■□□□□ 0.4
TPM3-211ENST00000368531 PCCAP05165 728 aaPredicted RBP17.56■□□□□ 0.4
TPM3-211ENST00000368531 RLBP1P12271 317 aa17.56■□□□□ 0.4
TPM3-211ENST00000368531 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
TPM3-211ENST00000368531 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
TPM3-211ENST00000368531 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
TPM3-211ENST00000368531 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
TPM3-211ENST00000368531 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
TPM3-211ENST00000368531 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
TPM3-211ENST00000368531 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
TPM3-211ENST00000368531 LAMB2P55268 1798 aa17.55■□□□□ 0.4
TPM3-211ENST00000368531 A0A0G2JLW4 131 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 H7C1W4 665 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 GRM8O00222 908 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 CHRNA5P30532 468 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 INTS3Q68E01 1043 aaKnown RBP17.54■□□□□ 0.4
TPM3-211ENST00000368531 C2CD5Q86YS7 1000 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 BRIP1Q9BX63 1249 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
TPM3-211ENST00000368531 MS4A1P11836 297 aa17.53■□□□□ 0.4
TPM3-211ENST00000368531 PDE6BP35913 854 aa17.53■□□□□ 0.4
TPM3-211ENST00000368531 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
TPM3-211ENST00000368531 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
TPM3-211ENST00000368531 SLC10A5Q5PT55 438 aa17.53■□□□□ 0.4
TPM3-211ENST00000368531 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
TPM3-211ENST00000368531 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
TPM3-211ENST00000368531 CACNA1SQ13698 1873 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.4
TPM3-211ENST00000368531 DPEP1P16444 411 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 MYH3P11055 1940 aa17.52■□□□□ 0.4
TPM3-211ENST00000368531 H0YIN7 160 aa17.51■□□□□ 0.39
TPM3-211ENST00000368531 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
TPM3-211ENST00000368531 CASP7P55210 303 aa17.51■□□□□ 0.39
TPM3-211ENST00000368531 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.392e-8■■□□□ 13.1
TPM3-211ENST00000368531 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
TPM3-211ENST00000368531 MEIS3Q99687 375 aa17.51■□□□□ 0.39
TPM3-211ENST00000368531 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
TPM3-211ENST00000368531 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
TPM3-211ENST00000368531 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
TPM3-211ENST00000368531 PDE8AO60658 829 aa17.5■□□□□ 0.39
TPM3-211ENST00000368531 TGFB2P61812 414 aa17.5■□□□□ 0.39
TPM3-211ENST00000368531 TAF1P21675 1872 aa17.5■□□□□ 0.39
TPM3-211ENST00000368531 RPGRQ92834 1020 aaKnown RBP17.49■□□□□ 0.39
TPM3-211ENST00000368531 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
TPM3-211ENST00000368531 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
TPM3-211ENST00000368531 UBTFL1P0CB47 393 aaPredicted RBP17.48■□□□□ 0.39
TPM3-211ENST00000368531 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
TPM3-211ENST00000368531 PDE3AQ14432 1141 aa17.48■□□□□ 0.39
TPM3-211ENST00000368531 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
TPM3-211ENST00000368531 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
TPM3-211ENST00000368531 UTYO14607 1347 aa17.47■□□□□ 0.39
TPM3-211ENST00000368531 SRGNP10124 158 aa17.47■□□□□ 0.39
TPM3-211ENST00000368531 KCNA3P22001 575 aa17.47■□□□□ 0.39
TPM3-211ENST00000368531 CTSWP56202 376 aa17.47■□□□□ 0.39
TPM3-211ENST00000368531 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
TPM3-211ENST00000368531 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms