RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 DDX21Q9NR30 783 aaKnown RBP eCLIP9.89□□□□□ -0.83
SSR2-202ENST00000368311 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
SSR2-202ENST00000368311 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
SSR2-202ENST00000368311 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
SSR2-202ENST00000368311 TECPR2O15040 1411 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 CPSF1Q10570 1443 aaKnown RBP9.88□□□□□ -0.83
SSR2-202ENST00000368311 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 SUPT20HL1Q3ZLR7 823 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 MCM10Q7L590 875 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 USP48Q86UV5 1035 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 TTLL6Q8N841 843 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 UBAC1Q9BSL1 405 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
SSR2-202ENST00000368311 CSADQ9Y600 493 aa9.88□□□□□ -0.83
SSR2-202ENST00000368311 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 IRS4O14654 1257 aaPredicted RBP9.87□□□□□ -0.83
SSR2-202ENST00000368311 RPS6KA4O75676 772 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 MKNK2Q9HBH9 465 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 SEC63Q9UGP8 760 aaKnown RBP9.87□□□□□ -0.83
SSR2-202ENST00000368311 SPATA31A1Q5TZJ5 1347 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 APBB1IPQ7Z5R6 666 aaPredicted RBP9.87□□□□□ -0.83
SSR2-202ENST00000368311 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 RGL2O15211 777 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 TTC6Q86TZ1 520 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 LINS1Q8NG48 757 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 CLUAP1Q96AJ1 413 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 ANO2Q9NQ90 1003 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 ERBB3P21860 1342 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 RGS3P49796 1198 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 NT5C2P49902 561 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 MASTLQ96GX5 879 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 PALLDQ8WX93 1383 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 CLTCL1P53675 1640 aa9.87□□□□□ -0.83
SSR2-202ENST00000368311 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 PPIP5K2O43314 1243 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 GPTP24298 496 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 TMEM87AQ8NBN3 555 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 CPDO75976 1380 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 MROH5Q6ZUA9 1318 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 SRGAP3O43295 1099 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 TXLNAP40222 546 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 FLIIQ13045 1269 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 SSH2Q76I76 1423 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
SSR2-202ENST00000368311 IMMTQ16891 758 aaKnown RBP9.86□□□□□ -0.83
SSR2-202ENST00000368311 TMEM132AQ24JP5 1023 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
SSR2-202ENST00000368311 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 SF3A1Q15459 793 aaKnown RBP9.85□□□□□ -0.83
SSR2-202ENST00000368311 HOXD10P28358 340 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 IQCA1Q86XH1 822 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 UFL1O94874 794 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
SSR2-202ENST00000368311 MCM2P49736 904 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 C2orf69Q8N8R5 385 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 CEP89Q96ST8 783 aa9.85□□□□□ -0.83
SSR2-202ENST00000368311 RNF216Q9NWF9 866 aaPredicted RBP9.85□□□□□ -0.83
SSR2-202ENST00000368311 NOL7Q9UMY1 257 aaKnown RBP9.85□□□□□ -0.83
SSR2-202ENST00000368311 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 KIF5BP33176 963 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 ECE1P42892 770 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 AACSQ86V21 672 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 LEMD3Q9Y2U8 911 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 SEMA3EO15041 775 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 TAOK3Q9H2K8 898 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 SPC25Q9HBM1 224 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 DLGAP5Q15398 846 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 TXNRD1Q16881 649 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 EAPPQ56P03 285 aaPredicted RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 COPS6Q7L5N1 327 aa9.84□□□□□ -0.83
SSR2-202ENST00000368311 NAP1L4Q99733 375 aaKnown RBP9.84□□□□□ -0.83
SSR2-202ENST00000368311 PPEF1O14829 653 aaPredicted RBP9.83□□□□□ -0.84
SSR2-202ENST00000368311 CDC45O75419 566 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 CCDC174Q6PII3 467 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 RGS12O14924 1447 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 CARMIL3Q8ND23 1372 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 LDHBP07195 334 aaKnown RBP9.83□□□□□ -0.84
SSR2-202ENST00000368311 GNAQP50148 359 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
SSR2-202ENST00000368311 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
SSR2-202ENST00000368311 CCNA1P78396 465 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 ARHGEF10LQ9HCE6 1279 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 ITSN1Q15811 1721 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 LRRIQ1Q96JM4 1722 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 LRRC7Q96NW7 1537 aa9.83□□□□□ -0.84
SSR2-202ENST00000368311 SUPT16HQ9Y5B9 1047 aaKnown RBP9.83□□□□□ -0.84
SSR2-202ENST00000368311 TGFB2P61812 414 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms