RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 KIAA0232Q92628 1395 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 ZBTB22O15209 634 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 CHGBP05060 677 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 BRF1Q92994 677 aa13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
NECTIN4-201ENST00000368012 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 PDCP20941 246 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 LTKP29376 864 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 COL9A3Q14050 684 aaPredicted RBP13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 CCDC73Q6ZRK6 1079 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 SMC2O95347 1197 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 UVSSAQ2YD98 709 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 MYD88Q99836 296 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
NECTIN4-201ENST00000368012 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 NEO1Q92859 1461 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 HOXC9P31274 260 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 TAF6LQ9Y6J9 622 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
NECTIN4-201ENST00000368012 CREBRFQ8IUR6 639 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 CRB1P82279 1406 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 A0A0D9SFI3 127 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.32
NECTIN4-201ENST00000368012 AP5Z1O43299 807 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 KINO60870 393 aaKnown RBP13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 NR1I2O75469 434 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 HAND2P61296 217 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 EVI5LQ96CN4 794 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 CBX8Q9HC52 389 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
NECTIN4-201ENST00000368012 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 SNRKQ9NRH2 765 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 HSP90AB3PQ58FF7 597 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
NECTIN4-201ENST00000368012 FLT4P35916 1363 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 SLC27A2O14975 620 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
NECTIN4-201ENST00000368012 Q6ZUG5 572 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 PREX1Q8TCU6 1659 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 TERF1P54274 439 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 DMTNQ08495 405 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
NECTIN4-201ENST00000368012 VPS53Q5VIR6 699 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 SUCLG2Q96I99 432 aa13□□□□□ -0.33
NECTIN4-201ENST00000368012 SCAND2PQ9GZW5 306 aaPredicted RBP13□□□□□ -0.33
NECTIN4-201ENST00000368012 APPP05067 770 aa12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms