RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RASSF7Q02833 373 aa30.82■■■□□ 2.52
PFDN2-201ENST00000368010 CRY2Q49AN0 593 aa30.82■■■□□ 2.52
PFDN2-201ENST00000368010 STK31Q9BXU1 1019 aa30.81■■■□□ 2.52
PFDN2-201ENST00000368010 RNF181Q9P0P0 153 aa30.81■■■□□ 2.52
PFDN2-201ENST00000368010 ARFGEF2Q9Y6D5 1785 aa30.81■■■□□ 2.52
PFDN2-201ENST00000368010 SOGA3Q5TF21 947 aa30.8■■■□□ 2.52
PFDN2-201ENST00000368010 RIC3Q7Z5B4 369 aa30.8■■■□□ 2.52
PFDN2-201ENST00000368010 NFKBIEO00221 500 aa30.79■■■□□ 2.52
PFDN2-201ENST00000368010 ALDH1B1P30837 517 aa30.79■■■□□ 2.52
PFDN2-201ENST00000368010 ZNF526Q8TF50 670 aaPredicted RBP30.79■■■□□ 2.52
PFDN2-201ENST00000368010 MYH16Q9H6N6 1097 aa30.79■■■□□ 2.52
PFDN2-201ENST00000368010 GPBP1L1Q9HC44 474 aaPredicted RBP30.79■■■□□ 2.52
PFDN2-201ENST00000368010 SLX4Q8IY92 1834 aa30.79■■■□□ 2.52
PFDN2-201ENST00000368010 SLC10A5Q5PT55 438 aa30.78■■■□□ 2.52
PFDN2-201ENST00000368010 RPGRQ92834 1020 aaKnown RBP30.78■■■□□ 2.52
PFDN2-201ENST00000368010 ISCA1Q9BUE6 129 aa30.78■■■□□ 2.52
PFDN2-201ENST00000368010 TRMT112Q9UI30 125 aaKnown RBP30.78■■■□□ 2.52
PFDN2-201ENST00000368010 CACNA1SQ13698 1873 aa30.78■■■□□ 2.52
PFDN2-201ENST00000368010 DDX58O95786 925 aaKnown RBP30.77■■■□□ 2.52
PFDN2-201ENST00000368010 LMNB1P20700 586 aa30.77■■■□□ 2.52
PFDN2-201ENST00000368010 NLRP3Q96P20 1036 aa30.77■■■□□ 2.52
PFDN2-201ENST00000368010 SH3TC1Q8TE82 1336 aa30.76■■■□□ 2.52
PFDN2-201ENST00000368010 ATP5J2-PTCD1G3V325 749 aa30.76■■■□□ 2.51
PFDN2-201ENST00000368010 SPINK5Q9NQ38 1064 aaPredicted RBP30.76■■■□□ 2.51
PFDN2-201ENST00000368010 TCERG1O14776 1098 aaKnown RBP30.75■■■□□ 2.51
PFDN2-201ENST00000368010 EXOSC9Q06265 439 aaKnown RBP30.75■■■□□ 2.51
PFDN2-201ENST00000368010 ZNF521Q96K83 1311 aa30.74■■■□□ 2.51
PFDN2-201ENST00000368010 HOXA10P31260 410 aaPredicted RBP30.74■■■□□ 2.51
PFDN2-201ENST00000368010 CCDC93Q567U6 631 aa30.74■■■□□ 2.51
PFDN2-201ENST00000368010 C7orf43Q8WVR3 580 aa30.74■■■□□ 2.51
PFDN2-201ENST00000368010 TAOK3Q9H2K8 898 aa30.74■■■□□ 2.51
PFDN2-201ENST00000368010 TRIM28Q13263 835 aaKnown RBP30.73■■■□□ 2.51
PFDN2-201ENST00000368010 C3orf67Q6ZVT6 689 aa30.73■■■□□ 2.51
PFDN2-201ENST00000368010 RBM17Q96I25 401 aaKnown RBP30.73■■■□□ 2.51
PFDN2-201ENST00000368010 LTBP3Q9NS15 1303 aa30.73■■■□□ 2.51
PFDN2-201ENST00000368010 SBF1O95248 1867 aa30.72■■■□□ 2.51
PFDN2-201ENST00000368010 PRELPP51888 382 aa30.72■■■□□ 2.51
PFDN2-201ENST00000368010 SLC4A2P04920 1241 aa30.71■■■□□ 2.51
PFDN2-201ENST00000368010 ZNF428Q96B54 188 aa30.71■■■□□ 2.51
PFDN2-201ENST00000368010 CRAMP1Q96RY5 1269 aa30.71■■■□□ 2.51
PFDN2-201ENST00000368010 MYD88Q99836 296 aa30.71■■■□□ 2.51
PFDN2-201ENST00000368010 FER1L6Q2WGJ9 1857 aa30.71■■■□□ 2.51
PFDN2-201ENST00000368010 ZC3H4Q9UPT8 1303 aaKnown RBP30.71■■■□□ 2.51
PFDN2-201ENST00000368010 VAMP4O75379 141 aa30.7■■■□□ 2.51
PFDN2-201ENST00000368010 HCLS1P14317 486 aaPredicted RBP30.7■■■□□ 2.51
PFDN2-201ENST00000368010 DIEXFQ68CQ4 756 aaKnown RBP30.7■■■□□ 2.51
PFDN2-201ENST00000368010 SYNE4Q8N205 404 aa30.7■■■□□ 2.51
PFDN2-201ENST00000368010 METTL22Q9BUU2 404 aaPredicted RBP30.69■■■□□ 2.5
PFDN2-201ENST00000368010 KSR2Q6VAB6 950 aa30.68■■■□□ 2.5
PFDN2-201ENST00000368010 MAP3K2Q9Y2U5 619 aa30.68■■■□□ 2.5
PFDN2-201ENST00000368010 FAM89AQ96GI7 184 aa30.67■■■□□ 2.5
PFDN2-201ENST00000368010 PI4KAP2A4QPH2 592 aa30.66■■■□□ 2.5
PFDN2-201ENST00000368010 OLFM4Q6UX06 510 aa30.66■■■□□ 2.5
PFDN2-201ENST00000368010 G2E3Q7L622 706 aa30.66■■■□□ 2.5
PFDN2-201ENST00000368010 RTKN2Q8IZC4 609 aa30.66■■■□□ 2.5
PFDN2-201ENST00000368010 PI4KAP1Q8N8J0 262 aa30.66■■■□□ 2.5
PFDN2-201ENST00000368010 CC2D2BQ6DHV5 1058 aa30.65■■■□□ 2.5
PFDN2-201ENST00000368010 CCDC191Q8NCU4 936 aa30.65■■■□□ 2.5
PFDN2-201ENST00000368010 KDM2BQ8NHM5 1336 aa30.65■■■□□ 2.5
PFDN2-201ENST00000368010 PPEF1O14829 653 aaPredicted RBP30.64■■■□□ 2.5
PFDN2-201ENST00000368010 FKBP4Q02790 459 aaKnown RBP eCLIP30.64■■■□□ 2.5
PFDN2-201ENST00000368010 FLIIQ13045 1269 aa30.64■■■□□ 2.5
PFDN2-201ENST00000368010 CWC25Q9NXE8 425 aaPredicted RBP30.64■■■□□ 2.5
PFDN2-201ENST00000368010 RTL5Q5HYW3 569 aaPredicted RBP30.63■■■□□ 2.49
PFDN2-201ENST00000368010 ZBTB38Q8NAP3 1195 aaPredicted RBP30.63■■■□□ 2.49
PFDN2-201ENST00000368010 ABCC4O15439 1325 aa30.63■■■□□ 2.49
PFDN2-201ENST00000368010 TIAM2Q8IVF5 1701 aa30.62■■■□□ 2.49
PFDN2-201ENST00000368010 LAMB2P55268 1798 aa30.62■■■□□ 2.49
PFDN2-201ENST00000368010 E9PSI1 815 aa30.62■■■□□ 2.49
PFDN2-201ENST00000368010 C1QTNF8P60827 252 aa30.62■■■□□ 2.49
PFDN2-201ENST00000368010 NEXNQ0ZGT2 675 aa30.62■■■□□ 2.49
PFDN2-201ENST00000368010 IRS4O14654 1257 aaPredicted RBP30.61■■■□□ 2.49
PFDN2-201ENST00000368010 DDX46Q7L014 1031 aaKnown RBP30.61■■■□□ 2.49
PFDN2-201ENST00000368010 DDX60Q8IY21 1712 aaKnown RBP30.61■■■□□ 2.49
PFDN2-201ENST00000368010 HSP90B1P14625 803 aaKnown RBP30.6■■■□□ 2.49
PFDN2-201ENST00000368010 FKBP5Q13451 457 aaPredicted RBP30.6■■■□□ 2.49
PFDN2-201ENST00000368010 CCDC88AQ3V6T2 1871 aa30.6■■■□□ 2.49
PFDN2-201ENST00000368010 GRIPAP1Q4V328 841 aa30.6■■■□□ 2.49
PFDN2-201ENST00000368010 TMX4Q9H1E5 349 aaPredicted RBP30.6■■■□□ 2.49
PFDN2-201ENST00000368010 SNED1Q8TER0 1413 aa30.59■■■□□ 2.49
PFDN2-201ENST00000368010 PCCAP05165 728 aaPredicted RBP30.59■■■□□ 2.49
PFDN2-201ENST00000368010 NMRK2Q9NPI5 230 aa30.59■■■□□ 2.49
PFDN2-201ENST00000368010 KIF3CO14782 793 aa30.58■■■□□ 2.49
PFDN2-201ENST00000368010 SF3B3Q15393 1217 aaKnown RBP30.58■■■□□ 2.49
PFDN2-201ENST00000368010 MIER1Q8N108 512 aa30.58■■■□□ 2.49
PFDN2-201ENST00000368010 BBOX1O75936 387 aa30.57■■■□□ 2.48
PFDN2-201ENST00000368010 IGKV5-2P06315 115 aa30.57■■■□□ 2.48
PFDN2-201ENST00000368010 GRAPQ13588 217 aa30.57■■■□□ 2.48
PFDN2-201ENST00000368010 GRAPLQ8TC17 118 aaPredicted RBP30.57■■■□□ 2.48
PFDN2-201ENST00000368010 PSMD1Q99460 953 aa30.57■■■□□ 2.48
PFDN2-201ENST00000368010 ZNF277Q9NRM2 450 aaPredicted RBP30.57■■■□□ 2.48
PFDN2-201ENST00000368010 ATP6V0A2Q9Y487 856 aa30.57■■■□□ 2.48
PFDN2-201ENST00000368010 GLTPD2A6NH11 291 aa30.56■■■□□ 2.48
PFDN2-201ENST00000368010 SLFN5Q08AF3 891 aa30.56■■■□□ 2.48
PFDN2-201ENST00000368010 CACNA1FO60840 1977 aa30.55■■■□□ 2.48
PFDN2-201ENST00000368010 DICER1Q9UPY3 1922 aaKnown RBP30.55■■■□□ 2.48
PFDN2-201ENST00000368010 DNAAF4Q8WXU2 420 aa30.55■■■□□ 2.48
PFDN2-201ENST00000368010 CWF19L2Q2TBE0 894 aaKnown RBP30.54■■■□□ 2.48
PFDN2-201ENST00000368010 DPY19L2Q6NUT2 758 aa30.54■■■□□ 2.48
PFDN2-201ENST00000368010 NEURL1BA8MQ27 555 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms