RNA–Protein interactions for RNA: ENST00000367393.7

C1orf53-201, Transcript of chromosome 1 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf53, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-201ENST00000367393 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
C1orf53-201ENST00000367393 TWISTNBQ3B726 338 aaPredicted RBP18.85■□□□□ 0.61
C1orf53-201ENST00000367393 NLRP10Q86W26 655 aa18.85■□□□□ 0.61
C1orf53-201ENST00000367393 UTP14AQ9BVJ6 771 aaKnown RBP18.85■□□□□ 0.61
C1orf53-201ENST00000367393 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
C1orf53-201ENST00000367393 ADCY9O60503 1353 aa18.84■□□□□ 0.61
C1orf53-201ENST00000367393 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
C1orf53-201ENST00000367393 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
C1orf53-201ENST00000367393 C21orf2O43822 256 aa18.84■□□□□ 0.61
C1orf53-201ENST00000367393 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
C1orf53-201ENST00000367393 TNRC6CQ9HCJ0 1690 aaKnown RBP18.84■□□□□ 0.61
C1orf53-201ENST00000367393 FER1L6Q2WGJ9 1857 aa18.84■□□□□ 0.61
C1orf53-201ENST00000367393 GOLGA2Q08379 1002 aa18.83■□□□□ 0.6
C1orf53-201ENST00000367393 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
C1orf53-201ENST00000367393 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
C1orf53-201ENST00000367393 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
C1orf53-201ENST00000367393 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
C1orf53-201ENST00000367393 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
C1orf53-201ENST00000367393 CRY2Q49AN0 593 aa18.82■□□□□ 0.6
C1orf53-201ENST00000367393 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
C1orf53-201ENST00000367393 STK31Q9BXU1 1019 aa18.82■□□□□ 0.6
C1orf53-201ENST00000367393 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
C1orf53-201ENST00000367393 RASSF7Q02833 373 aa18.81■□□□□ 0.6
C1orf53-201ENST00000367393 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
C1orf53-201ENST00000367393 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
C1orf53-201ENST00000367393 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
C1orf53-201ENST00000367393 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
C1orf53-201ENST00000367393 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
C1orf53-201ENST00000367393 RNF123Q5XPI4 1314 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 VAMP4O75379 141 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 SYNE4Q8N205 404 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 ZNF526Q8TF50 670 aaPredicted RBP18.8■□□□□ 0.6
C1orf53-201ENST00000367393 C7orf43Q8WVR3 580 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 RPGRQ92834 1020 aaKnown RBP18.8■□□□□ 0.6
C1orf53-201ENST00000367393 ZNF428Q96B54 188 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 NLRP3Q96P20 1036 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 LAMB2P55268 1798 aa18.8■□□□□ 0.6
C1orf53-201ENST00000367393 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
C1orf53-201ENST00000367393 NFKBIEO00221 500 aa18.79■□□□□ 0.6
C1orf53-201ENST00000367393 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
C1orf53-201ENST00000367393 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
C1orf53-201ENST00000367393 TRIM28Q13263 835 aaKnown RBP18.79■□□□□ 0.6
C1orf53-201ENST00000367393 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
C1orf53-201ENST00000367393 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
C1orf53-201ENST00000367393 LMNB1P20700 586 aa18.78■□□□□ 0.6
C1orf53-201ENST00000367393 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
C1orf53-201ENST00000367393 SOGA3Q5TF21 947 aa18.78■□□□□ 0.6
C1orf53-201ENST00000367393 C3orf67Q6ZVT6 689 aa18.78■□□□□ 0.6
C1orf53-201ENST00000367393 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
C1orf53-201ENST00000367393 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
C1orf53-201ENST00000367393 PRELPP51888 382 aa18.77■□□□□ 0.6
C1orf53-201ENST00000367393 RBM17Q96I25 401 aaKnown RBP18.77■□□□□ 0.6
C1orf53-201ENST00000367393 MYD88Q99836 296 aa18.77■□□□□ 0.6
C1orf53-201ENST00000367393 KSR2Q6VAB6 950 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 G2E3Q7L622 706 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 MIER1Q8N108 512 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
C1orf53-201ENST00000367393 MAP3K2Q9Y2U5 619 aa18.76■□□□□ 0.59
C1orf53-201ENST00000367393 TAF1P21675 1872 aa18.75■□□□□ 0.59
C1orf53-201ENST00000367393 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
C1orf53-201ENST00000367393 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
C1orf53-201ENST00000367393 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
C1orf53-201ENST00000367393 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
C1orf53-201ENST00000367393 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
C1orf53-201ENST00000367393 LTBP3Q9NS15 1303 aa18.74■□□□□ 0.59
C1orf53-201ENST00000367393 C1QBPQ07021 282 aaKnown RBP18.74■□□□□ 0.59
C1orf53-201ENST00000367393 TAOK3Q9H2K8 898 aa18.74■□□□□ 0.59
C1orf53-201ENST00000367393 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
C1orf53-201ENST00000367393 RTKN2Q8IZC4 609 aa18.73■□□□□ 0.59
C1orf53-201ENST00000367393 CCDC191Q8NCU4 936 aa18.73■□□□□ 0.59
C1orf53-201ENST00000367393 FLIIQ13045 1269 aa18.72■□□□□ 0.59
C1orf53-201ENST00000367393 ZBTB38Q8NAP3 1195 aaPredicted RBP18.72■□□□□ 0.59
C1orf53-201ENST00000367393 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
C1orf53-201ENST00000367393 E9PSI1 815 aa18.71■□□□□ 0.59
C1orf53-201ENST00000367393 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
C1orf53-201ENST00000367393 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
C1orf53-201ENST00000367393 IRS4O14654 1257 aaPredicted RBP18.7■□□□□ 0.58
C1orf53-201ENST00000367393 PPEF1O14829 653 aaPredicted RBP18.7■□□□□ 0.58
C1orf53-201ENST00000367393 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
C1orf53-201ENST00000367393 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
C1orf53-201ENST00000367393 NEXNQ0ZGT2 675 aa18.7■□□□□ 0.58
C1orf53-201ENST00000367393 FKBP5Q13451 457 aaPredicted RBP18.7■□□□□ 0.58
C1orf53-201ENST00000367393 CC2D2BQ6DHV5 1058 aa18.7■□□□□ 0.58
C1orf53-201ENST00000367393 DDX46Q7L014 1031 aaKnown RBP18.7■□□□□ 0.58
C1orf53-201ENST00000367393 BBOX1O75936 387 aa18.69■□□□□ 0.58
C1orf53-201ENST00000367393 PCCAP05165 728 aaPredicted RBP18.69■□□□□ 0.58
C1orf53-201ENST00000367393 IGKV5-2P06315 115 aa18.69■□□□□ 0.58
C1orf53-201ENST00000367393 SF3B3Q15393 1217 aaKnown RBP18.69■□□□□ 0.58
C1orf53-201ENST00000367393 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
C1orf53-201ENST00000367393 ABCC4O15439 1325 aa18.69■□□□□ 0.58
C1orf53-201ENST00000367393 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
C1orf53-201ENST00000367393 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
C1orf53-201ENST00000367393 GRIPAP1Q4V328 841 aa18.68■□□□□ 0.58
C1orf53-201ENST00000367393 CDCA7LQ96GN5 454 aa18.68■□□□□ 0.58
C1orf53-201ENST00000367393 KIF3CO14782 793 aa18.67■□□□□ 0.58
C1orf53-201ENST00000367393 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms