RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 MRPL50Q8N5N7 158 aaKnown RBP4.21□□□□□ -1.73
PTPRC-203ENST00000367367 DDX54Q8TDD1 881 aaKnown RBP4.21□□□□□ -1.73
PTPRC-203ENST00000367367 RAPGEF4Q8WZA2 1011 aa4.21□□□□□ -1.73
PTPRC-203ENST00000367367 TBC1D12O60347 775 aa4.21□□□□□ -1.74
PTPRC-203ENST00000367367 TREML4Q6UXN2 200 aa4.21□□□□□ -1.74
PTPRC-203ENST00000367367 ACSBG1Q96GR2 724 aa4.21□□□□□ -1.74
PTPRC-203ENST00000367367 SIPA1L3O60292 1781 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-203ENST00000367367 C5P01031 1676 aa4.21□□□□□ -1.74
PTPRC-203ENST00000367367 KDRP35968 1356 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 TMEM88BA6NKF7 163 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 KCNQ2O43526 872 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 HMOX1P09601 288 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 TATP17735 454 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 PPP2R1AP30153 589 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 IL13P35225 146 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 EN1Q05925 392 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 SF3B2Q13435 895 aaKnown RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 CALR3Q96L12 384 aaKnown RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 MYH14Q7Z406 1995 aaKnown RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 CYP27B1O15528 508 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 SULT6B1Q6IMI4 303 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 ZCRB1Q8TBF4 217 aaKnown RBP4.2□□□□□ -1.74
PTPRC-203ENST00000367367 BCL9O00512 1426 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 PCDH11XQ9BZA7 1347 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 PCDH11YQ9BZA8 1340 aa4.2□□□□□ -1.74
PTPRC-203ENST00000367367 ADAMTS7Q9UKP4 1686 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 SPDYE16A6NNV3 312 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 BHMG1C9JSJ3 638 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 U2SURPO15042 1029 aaKnown RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 APBA3O96018 575 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 COL5A3P25940 1745 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 BAG6P46379 1132 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 FOXK1P85037 733 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 KCNC4Q03721 635 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 QPCTQ16769 361 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 UBR3Q6ZT12 1888 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 SYTL4Q96C24 671 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 PAPPAQ13219 1627 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 UBR2Q8IWV8 1755 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 BRD1O95696 1058 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 SCNN1AP37088 669 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 ABL2P42684 1182 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 EZH2Q15910 746 aaKnown RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 CCDC27Q2M243 656 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 CCDC125Q86Z20 511 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 UCN2Q96RP3 112 aa4.19□□□□□ -1.74
PTPRC-203ENST00000367367 FAM217BQ9NTX9 383 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-203ENST00000367367 QSER1Q2KHR3 1735 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 KDM6AO15550 1401 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-203ENST00000367367 FCHSD2O94868 740 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 PLPP6Q8IY26 295 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 PRKD2Q9BZL6 878 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 CASZ1Q86V15 1759 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 TJP1Q07157 1748 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 CDK11BP21127 795 aaKnown RBP4.18□□□□□ -1.74
PTPRC-203ENST00000367367 TSR1Q2NL82 804 aaKnown RBP4.18□□□□□ -1.74
PTPRC-203ENST00000367367 PHLDB3Q6NSJ2 640 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 ZNF530Q6P9A1 599 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-203ENST00000367367 SND1Q7KZF4 910 aaKnown RBP eCLIP4.18□□□□□ -1.742e-7■■■□□ 16.8
PTPRC-203ENST00000367367 CFAP53Q96M91 514 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 CAMKK2Q96RR4 588 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 PRKRIP1Q9H875 184 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-203ENST00000367367 GPCPD1Q9NPB8 672 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
PTPRC-203ENST00000367367 MYBBP1AQ9BQG0 1328 aaKnown RBP4.17□□□□□ -1.74
PTPRC-203ENST00000367367 C4AP0C0L4 1744 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 C4BP0C0L5 1744 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 U2AF1L5P0DN76 240 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-203ENST00000367367 HSP90B1P14625 803 aaKnown RBP4.17□□□□□ -1.74
PTPRC-203ENST00000367367 PHKG2P15735 406 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 PRKAR2BP31323 418 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 KCNQ4P56696 695 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 U2AF1Q01081 240 aaKnown RBP eCLIP4.17□□□□□ -1.74
PTPRC-203ENST00000367367 RALBP1Q15311 655 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 HDGFL1Q5TGJ6 251 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 MPRIPQ6WCQ1 1025 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 DHX37Q8IY37 1157 aaKnown RBP4.17□□□□□ -1.74
PTPRC-203ENST00000367367 IFNL2Q8IZJ0 200 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 MRC1P22897 1456 aa4.17□□□□□ -1.74
PTPRC-203ENST00000367367 MTHFSDQ2M296 383 aaKnown RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 C1orf141Q5JVX7 400 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 TMC2Q8TDI7 906 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PBXIP1Q96AQ6 731 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 HMX1Q9NP08 348 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 ZNF831Q5JPB2 1677 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PLEKHG2Q9H7P9 1386 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 KDM3BQ7LBC6 1761 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PLSCR1O15162 318 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 CLK2P49760 499 aaKnown RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 TAGLNQ01995 201 aaKnown RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 TXNRD1Q16881 649 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PLEKHO1Q53GL0 409 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 DNAJC14Q6Y2X3 702 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PHACTR3Q96KR7 559 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 SLC4A5Q9BY07 1137 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 TBC1D2Q9BYX2 928 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 ANO8Q9HCE9 1232 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-203ENST00000367367 NUDCQ9Y266 331 aa4.16□□□□□ -1.74
PTPRC-203ENST00000367367 PALLDQ8WX93 1383 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms