RNA–Protein interactions for RNA: ENST00000367309.1

PHLDA3-201, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHLDA3, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-201ENST00000367309 PHAXQ9H814 394 aaKnown RBP27.7■■■□□ 2.02
PHLDA3-201ENST00000367309 SPINK5Q9NQ38 1064 aaPredicted RBP27.7■■■□□ 2.02
PHLDA3-201ENST00000367309 SLC10A5Q5PT55 438 aa27.69■■■□□ 2.02
PHLDA3-201ENST00000367309 TNRC6CQ9HCJ0 1690 aaKnown RBP27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 GOLGA2Q08379 1002 aa27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 PRPF40BQ6NWY9 871 aaKnown RBP27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 ISCA1Q9BUE6 129 aa27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 MYH16Q9H6N6 1097 aa27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 ARFGEF2Q9Y6D5 1785 aa27.68■■■□□ 2.02
PHLDA3-201ENST00000367309 TRIM28Q13263 835 aaKnown RBP27.67■■■□□ 2.02
PHLDA3-201ENST00000367309 ZNF526Q8TF50 670 aaPredicted RBP27.67■■■□□ 2.02
PHLDA3-201ENST00000367309 SLX4Q8IY92 1834 aa27.67■■■□□ 2.02
PHLDA3-201ENST00000367309 STK31Q9BXU1 1019 aa27.66■■■□□ 2.02
PHLDA3-201ENST00000367309 C21orf2O43822 256 aa27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 HOXA10P31260 410 aaPredicted RBP27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 EXOSC9Q06265 439 aaKnown RBP27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 DIEXFQ68CQ4 756 aaKnown RBP27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 C7orf43Q8WVR3 580 aa27.65■■■□□ 2.02
PHLDA3-201ENST00000367309 NFKBIEO00221 500 aa27.64■■■□□ 2.02
PHLDA3-201ENST00000367309 VAMP4O75379 141 aa27.64■■■□□ 2.02
PHLDA3-201ENST00000367309 ALDH1B1P30837 517 aa27.64■■■□□ 2.02
PHLDA3-201ENST00000367309 RIC3Q7Z5B4 369 aa27.64■■■□□ 2.02
PHLDA3-201ENST00000367309 SOGA3Q5TF21 947 aa27.63■■■□□ 2.01
PHLDA3-201ENST00000367309 TRMT112Q9UI30 125 aaKnown RBP27.63■■■□□ 2.01
PHLDA3-201ENST00000367309 SH3TC1Q8TE82 1336 aa27.63■■■□□ 2.01
PHLDA3-201ENST00000367309 SBF1O95248 1867 aa27.62■■■□□ 2.01
PHLDA3-201ENST00000367309 KIF3CO14782 793 aa27.62■■■□□ 2.01
PHLDA3-201ENST00000367309 DDX58O95786 925 aaKnown RBP27.62■■■□□ 2.01
PHLDA3-201ENST00000367309 RASSF7Q02833 373 aa27.62■■■□□ 2.01
PHLDA3-201ENST00000367309 NLRP3Q96P20 1036 aa27.62■■■□□ 2.01
PHLDA3-201ENST00000367309 ATP5J2-PTCD1G3V325 749 aa27.61■■■□□ 2.01
PHLDA3-201ENST00000367309 C3orf67Q6ZVT6 689 aa27.61■■■□□ 2.01
PHLDA3-201ENST00000367309 ZNF219Q9P2Y4 722 aaPredicted RBP27.61■■■□□ 2.01
PHLDA3-201ENST00000367309 FER1L6Q2WGJ9 1857 aa27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 TCERG1O14776 1098 aaKnown RBP27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 SLC4A2P04920 1241 aa27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 LMNB1P20700 586 aa27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 RPGRQ92834 1020 aaKnown RBP27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 RNF181Q9P0P0 153 aa27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 LTBP3Q9NS15 1303 aa27.6■■■□□ 2.01
PHLDA3-201ENST00000367309 CACNA1SQ13698 1873 aa27.59■■■□□ 2.01
PHLDA3-201ENST00000367309 PRELPP51888 382 aa27.59■■■□□ 2.01
PHLDA3-201ENST00000367309 SYNE4Q8N205 404 aa27.59■■■□□ 2.01
PHLDA3-201ENST00000367309 CRAMP1Q96RY5 1269 aa27.59■■■□□ 2.01
PHLDA3-201ENST00000367309 KSR2Q6VAB6 950 aa27.58■■■□□ 2.01
PHLDA3-201ENST00000367309 METTL22Q9BUU2 404 aaPredicted RBP27.58■■■□□ 2.01
PHLDA3-201ENST00000367309 HCLS1P14317 486 aaPredicted RBP27.57■■■□□ 2
PHLDA3-201ENST00000367309 G2E3Q7L622 706 aa27.57■■■□□ 2
PHLDA3-201ENST00000367309 RBM17Q96I25 401 aaKnown RBP27.57■■■□□ 2
PHLDA3-201ENST00000367309 ZC3H4Q9UPT8 1303 aaKnown RBP27.57■■■□□ 2
PHLDA3-201ENST00000367309 CACNA1FO60840 1977 aa27.57■■■□□ 2
PHLDA3-201ENST00000367309 PI4KAP2A4QPH2 592 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 CCDC93Q567U6 631 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 MIER1Q8N108 512 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 PI4KAP1Q8N8J0 262 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 MYD88Q99836 296 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 MAP3K2Q9Y2U5 619 aa27.56■■■□□ 2
PHLDA3-201ENST00000367309 E9PSI1 815 aa27.55■■■□□ 2
PHLDA3-201ENST00000367309 CCDC191Q8NCU4 936 aa27.55■■■□□ 2
PHLDA3-201ENST00000367309 FAM89AQ96GI7 184 aa27.55■■■□□ 2
PHLDA3-201ENST00000367309 TAOK3Q9H2K8 898 aa27.55■■■□□ 2
PHLDA3-201ENST00000367309 FLIIQ13045 1269 aa27.54■■■□□ 2
PHLDA3-201ENST00000367309 APLP1P51693 650 aa27.53■■■□□ 2
PHLDA3-201ENST00000367309 ZNF428Q96B54 188 aa27.53■■■□□ 2
PHLDA3-201ENST00000367309 SNED1Q8TER0 1413 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 TOMM70O94826 608 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 SLFN5Q08AF3 891 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 CC2D2BQ6DHV5 1058 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 RTKN2Q8IZC4 609 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 ZBTB38Q8NAP3 1195 aaPredicted RBP27.52■■■□□ 2
PHLDA3-201ENST00000367309 LAMB2P55268 1798 aa27.52■■■□□ 2
PHLDA3-201ENST00000367309 DDX60Q8IY21 1712 aaKnown RBP27.51■■□□□ 1.99
PHLDA3-201ENST00000367309 OLFM4Q6UX06 510 aa27.51■■□□□ 1.99
PHLDA3-201ENST00000367309 CWC25Q9NXE8 425 aaPredicted RBP27.51■■□□□ 1.99
PHLDA3-201ENST00000367309 ABCC4O15439 1325 aa27.5■■□□□ 1.99
PHLDA3-201ENST00000367309 IGKV5-2P06315 115 aa27.5■■□□□ 1.99
PHLDA3-201ENST00000367309 CCDC88AQ3V6T2 1871 aa27.49■■□□□ 1.99
PHLDA3-201ENST00000367309 IRS4O14654 1257 aaPredicted RBP27.49■■□□□ 1.99
PHLDA3-201ENST00000367309 PCCAP05165 728 aaPredicted RBP27.49■■□□□ 1.99
PHLDA3-201ENST00000367309 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
PHLDA3-201ENST00000367309 SF3B3Q15393 1217 aaKnown RBP27.49■■□□□ 1.99
PHLDA3-201ENST00000367309 PPEF1O14829 653 aaPredicted RBP27.48■■□□□ 1.99
PHLDA3-201ENST00000367309 NEXNQ0ZGT2 675 aa27.48■■□□□ 1.99
PHLDA3-201ENST00000367309 FKBP5Q13451 457 aaPredicted RBP27.48■■□□□ 1.99
PHLDA3-201ENST00000367309 GRIPAP1Q4V328 841 aa27.48■■□□□ 1.99
PHLDA3-201ENST00000367309 BBOX1O75936 387 aa27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 HSP90B1P14625 803 aaKnown RBP27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 RTL5Q5HYW3 569 aaPredicted RBP27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 DDX46Q7L014 1031 aaKnown RBP27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 TRMT2AQ8IZ69 625 aaKnown RBP27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 DICER1Q9UPY3 1922 aaKnown RBP27.47■■□□□ 1.99
PHLDA3-201ENST00000367309 PSMD1Q99460 953 aa27.46■■□□□ 1.99
PHLDA3-201ENST00000367309 NEURL1BA8MQ27 555 aa27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 GRAPQ13588 217 aa27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 GRAPLQ8TC17 118 aaPredicted RBP27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 DNAAF4Q8WXU2 420 aa27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 CDCA7LQ96GN5 454 aa27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 ATP6V0A2Q9Y487 856 aa27.45■■□□□ 1.98
PHLDA3-201ENST00000367309 TIAM2Q8IVF5 1701 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms