RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-202ENST00000367279 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 MYD88Q99836 296 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
PTPN7-202ENST00000367279 EPB41L2O43491 1005 aaKnown RBP14.72□□□□□ -0.05
PTPN7-202ENST00000367279 COL9A3Q14050 684 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-202ENST00000367279 MTMR6Q9Y217 621 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 LTN1O94822 1766 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-202ENST00000367279 A0A0D9SFI3 127 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 FOSBP53539 338 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 BLOC1S2Q6QNY1 142 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 SPC24Q8NBT2 197 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 LINS1Q8NG48 757 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 ZSCAN31Q96LW9 406 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-202ENST00000367279 TPCN1Q9ULQ1 816 aa14.72□□□□□ -0.05
PTPN7-202ENST00000367279 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
PTPN7-202ENST00000367279 SLIT1O75093 1534 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 FGD1P98174 961 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
PTPN7-202ENST00000367279 ARHGAP23Q9P227 1491 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 CSB-PGBD3P0DP91 1061 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 HSP90B1P14625 803 aaKnown RBP14.71□□□□□ -0.05
PTPN7-202ENST00000367279 FAM184AQ8NB25 1140 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 SH2B1Q9NRF2 756 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-202ENST00000367279 AXIN2Q9Y2T1 843 aa14.71□□□□□ -0.05
PTPN7-202ENST00000367279 XAGE3Q8WTP9 111 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 NAP1L2Q9ULW6 460 aaPredicted RBP14.7□□□□□ -0.06
PTPN7-202ENST00000367279 SLC27A2O14975 620 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 COPS6Q7L5N1 327 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 RAPGEF4Q8WZA2 1011 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 TAF6LQ9Y6J9 622 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 PXDNQ92626 1479 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 LETM1O95202 739 aaPredicted RBP14.7□□□□□ -0.06
PTPN7-202ENST00000367279 PSMA5P28066 241 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 MCM5P33992 734 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 NECTIN1Q15223 517 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 CDC37L1Q7L3B6 337 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 RGPD2P0DJD1 1756 aa14.7□□□□□ -0.06
PTPN7-202ENST00000367279 MTX1Q13505 466 aa14.69□□□□□ -0.06
PTPN7-202ENST00000367279 NFATC2IPQ8NCF5 419 aa14.69□□□□□ -0.06
PTPN7-202ENST00000367279 KAZALD1Q96I82 304 aa14.69□□□□□ -0.06
PTPN7-202ENST00000367279 DDX21Q9NR30 783 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTPN7-202ENST00000367279 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 HIP1O00291 1037 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
PTPN7-202ENST00000367279 CKAP2LQ8IYA6 745 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 IL17RAQ96F46 866 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 KRT85P78386 507 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 ARHGEF25Q86VW2 580 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 USP42Q9H9J4 1324 aaKnown RBP14.68□□□□□ -0.06
PTPN7-202ENST00000367279 ST3GAL1Q11201 340 aa14.68□□□□□ -0.06
PTPN7-202ENST00000367279 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
PTPN7-202ENST00000367279 ZNF589Q86UQ0 364 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-202ENST00000367279 PPFIA3O75145 1194 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 CHGBP05060 677 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 IGKV5-2P06315 115 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 UVSSAQ2YD98 709 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 EPHA10Q5JZY3 1008 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 CCDC129Q6ZRS4 1044 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 CEBPZQ03701 1054 aaKnown RBP14.67□□□□□ -0.06
PTPN7-202ENST00000367279 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 KRT28Q7Z3Y7 464 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 TTC5Q8N0Z6 440 aa14.67□□□□□ -0.06
PTPN7-202ENST00000367279 KDM4AO75164 1064 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 ZNF790Q6PG37 636 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 SASS6Q6UVJ0 657 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 TTC6Q86TZ1 520 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 DRC7Q8IY82 874 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 TM6SF1Q9BZW5 370 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 PDCL3Q9H2J4 239 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
PTPN7-202ENST00000367279 BICD2Q8TD16 824 aa14.66□□□□□ -0.06
PTPN7-202ENST00000367279 CCDC192P0DO97 292 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 TFCP2Q12800 502 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 TSC1Q92574 1164 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 SEC62Q99442 399 aaKnown RBP14.65□□□□□ -0.06
PTPN7-202ENST00000367279 NUP62CLQ9H1M0 184 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 NEURL1BA8MQ27 555 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 H3BQV1 296 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 LIG1P18858 919 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 DDX46Q7L014 1031 aaKnown RBP14.65□□□□□ -0.06
PTPN7-202ENST00000367279 DDX17Q92841 729 aaKnown RBP14.65□□□□□ -0.06
PTPN7-202ENST00000367279 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 GCKRQ14397 625 aa14.65□□□□□ -0.06
PTPN7-202ENST00000367279 NOLC1Q14978 699 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTPN7-202ENST00000367279 FER1L4A9Z1Z3 1794 aa14.65□□□□□ -0.07
PTPN7-202ENST00000367279 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
PTPN7-202ENST00000367279 PDCP20941 246 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms