RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
CD46-208ENST00000367042 LRRC2Q9BYS8 371 aa9.71□□□□□ -0.86
CD46-208ENST00000367042 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
CD46-208ENST00000367042 EID1Q9Y6B2 187 aa9.71□□□□□ -0.86
CD46-208ENST00000367042 TPM3P06753 285 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 PDCP20941 246 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 FILIP1Q7Z7B0 1213 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 KCNF1Q9H3M0 494 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 TNNT1P13805 278 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 ZNF165P49910 485 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 ATP2B3Q16720 1220 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
CD46-208ENST00000367042 ZNF771Q7L3S4 317 aaPredicted RBP9.7□□□□□ -0.86
CD46-208ENST00000367042 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 KIAA1524Q8TCG1 905 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 NDUFB9Q9Y6M9 179 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 AOX1Q06278 1338 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
CD46-208ENST00000367042 HOXC9P31274 260 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 ZRSR1Q15695 479 aaKnown RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 DNAJC2Q99543 621 aaKnown RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 CLIP2Q9UDT6 1046 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.69□□□□□ -0.86
CD46-208ENST00000367042 V9GYY5 206 aaPredicted RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 TOPAZ1Q8N9V7 1692 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
CD46-208ENST00000367042 USP6P35125 1406 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
CD46-208ENST00000367042 MYL6BP14649 208 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 CCDC112Q8NEF3 446 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
CD46-208ENST00000367042 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
CD46-208ENST00000367042 PRDM4Q9UKN5 801 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 A0A087WWV3 80 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 GUCY1B3Q02153 619 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 COL9A3Q14050 684 aaPredicted RBP9.68□□□□□ -0.86
CD46-208ENST00000367042 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 BEND3Q5T5X7 828 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 MRVI1Q9Y6F6 885 aa9.68□□□□□ -0.86
CD46-208ENST00000367042 TTC41PQ6P2S7 1318 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 JAK2O60674 1132 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 NR1I2O75469 434 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 LRRC59Q96AG4 307 aaKnown RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 SLC27A2O14975 620 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 POLA2Q14181 598 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 NAA30Q147X3 362 aaPredicted RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 TLR7Q9NYK1 1049 aaKnown RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 ITSN1Q15811 1721 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 HTATSF1O43719 755 aaKnown RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 ERCC4Q92889 916 aaPredicted RBP9.67□□□□□ -0.86
CD46-208ENST00000367042 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
CD46-208ENST00000367042 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 ANKRD1Q15327 319 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 BRF1Q92994 677 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 TAF6LQ9Y6J9 622 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 PRAMEF22A3QJZ6 481 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 PROSER3Q2NL68 480 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 EAF2Q96CJ1 260 aaPredicted RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 OVOS2A0A0J9YW53 1432 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 OVOS2Q6IE36 1432 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 LEO1Q8WVC0 666 aaPredicted RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 FUCA2Q9BTY2 467 aa9.66□□□□□ -0.86
CD46-208ENST00000367042 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 DDX19AQ9NUU7 478 aaKnown RBP9.66□□□□□ -0.86
CD46-208ENST00000367042 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.86
CD46-208ENST00000367042 HIP1O00291 1037 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 CCT2P78371 535 aaKnown RBP9.65□□□□□ -0.86
CD46-208ENST00000367042 CCDC129Q6ZRS4 1044 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.86
CD46-208ENST00000367042 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 EPB41L2O43491 1005 aaKnown RBP9.65□□□□□ -0.86
CD46-208ENST00000367042 ME1P48163 572 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 DIP2AQ14689 1571 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 NECTIN1Q15223 517 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 CCDC73Q6ZRK6 1079 aa9.65□□□□□ -0.86
CD46-208ENST00000367042 ZSCAN20P17040 1043 aaPredicted RBP9.64□□□□□ -0.87
CD46-208ENST00000367042 ZNF75DP51815 510 aa9.64□□□□□ -0.87
CD46-208ENST00000367042 DMTNQ08495 405 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms