RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
CAPN8-201ENST00000366872 IFIT2P09913 472 aaKnown RBP15.21■□□□□ 0.03
CAPN8-201ENST00000366872 ADCK5Q3MIX3 580 aa15.21■□□□□ 0.03
CAPN8-201ENST00000366872 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
CAPN8-201ENST00000366872 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
CAPN8-201ENST00000366872 RBM8AQ9Y5S9 174 aaKnown RBP15.21■□□□□ 0.03
CAPN8-201ENST00000366872 COL15A1P39059 1388 aa15.21■□□□□ 0.02
CAPN8-201ENST00000366872 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.02
CAPN8-201ENST00000366872 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.02
CAPN8-201ENST00000366872 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.02
CAPN8-201ENST00000366872 ABCC6O95255 1503 aa15.21■□□□□ 0.02
CAPN8-201ENST00000366872 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
CAPN8-201ENST00000366872 CTIFO43310 598 aaKnown RBP15.2■□□□□ 0.02
CAPN8-201ENST00000366872 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
CAPN8-201ENST00000366872 PLEKHG2Q9H7P9 1386 aa15.2■□□□□ 0.02
CAPN8-201ENST00000366872 FOXD4L6Q3SYB3 417 aaPredicted RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 FOXD4L3Q6VB84 417 aaPredicted RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 THEMISQ8N1K5 641 aaPredicted RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 KCNH5Q8NCM2 988 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 KCNF1Q9H3M0 494 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 SLC27A2O14975 620 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 KRT32Q14532 448 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
CAPN8-201ENST00000366872 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
CAPN8-201ENST00000366872 AP5Z1O43299 807 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 RPS6KB1P23443 525 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 CDC25BP30305 580 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
CAPN8-201ENST00000366872 PRDM4Q9UKN5 801 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 TYRO3Q06418 890 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 TEFQ10587 303 aa15.18■□□□□ 0.02
CAPN8-201ENST00000366872 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
CAPN8-201ENST00000366872 BLOC1S2Q6QNY1 142 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 ANKRD7Q92527 254 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
CAPN8-201ENST00000366872 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
CAPN8-201ENST00000366872 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 C5P01031 1676 aa15.17■□□□□ 0.02
CAPN8-201ENST00000366872 GRM8O00222 908 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 RNMTO43148 476 aaKnown RBP15.16■□□□□ 0.02
CAPN8-201ENST00000366872 CPA1P15085 419 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
CAPN8-201ENST00000366872 NBPF6Q5VWK0 638 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 NBPF4Q96M43 638 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
CAPN8-201ENST00000366872 VPS37CA5D8V6 355 aaPredicted RBP15.16■□□□□ 0.02
CAPN8-201ENST00000366872 SASH1O94885 1247 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
CAPN8-201ENST00000366872 AACSQ86V21 672 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 SPEF2Q9C093 1822 aa15.16■□□□□ 0.02
CAPN8-201ENST00000366872 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
CAPN8-201ENST00000366872 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
CAPN8-201ENST00000366872 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
CAPN8-201ENST00000366872 MST1RQ04912 1400 aa15.15■□□□□ 0.02
CAPN8-201ENST00000366872 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.02
CAPN8-201ENST00000366872 TOB2Q14106 344 aaPredicted RBP15.15■□□□□ 0.02
CAPN8-201ENST00000366872 PYCARDQ9ULZ3 195 aa15.15■□□□□ 0.02
CAPN8-201ENST00000366872 PXDNQ92626 1479 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 ATL3Q6DD88 541 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 SARM1Q6SZW1 724 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 EAF2Q96CJ1 260 aaPredicted RBP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 LLPHQ9BRT6 129 aaKnown RBP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 TNMDQ9H2S6 317 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 PHF8Q9UPP1 1060 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 LEO1Q8WVC0 666 aaPredicted RBP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 BCL2L12Q9HB09 334 aa15.14■□□□□ 0.01
CAPN8-201ENST00000366872 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
CAPN8-201ENST00000366872 ZNF142P52746 1687 aaPredicted RBP15.13■□□□□ 0.01
CAPN8-201ENST00000366872 CTAGE5O15320 804 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 NEMFO60524 1076 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 LIG1P18858 919 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 KCNQ3O43525 872 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 KCNJ4P48050 445 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 FAM227BQ96M60 508 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 GTPBP4Q9BZE4 634 aaKnown RBP15.13■□□□□ 0.01
CAPN8-201ENST00000366872 CBX8Q9HC52 389 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
CAPN8-201ENST00000366872 ZNF75DP51815 510 aa15.12■□□□□ 0.01
CAPN8-201ENST00000366872 DMTNQ08495 405 aa15.12■□□□□ 0.01
CAPN8-201ENST00000366872 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
CAPN8-201ENST00000366872 SUCLG2Q96I99 432 aa15.12■□□□□ 0.01
CAPN8-201ENST00000366872 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms