RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
PARP1-201ENST00000366790 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
PARP1-201ENST00000366790 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
PARP1-201ENST00000366790 PSMD1Q99460 953 aa13.6□□□□□ -0.23
PARP1-201ENST00000366790 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
PARP1-201ENST00000366790 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
PARP1-201ENST00000366790 NEUROD2Q15784 382 aa13.59□□□□□ -0.23
PARP1-201ENST00000366790 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
PARP1-201ENST00000366790 KLRG1Q96E93 195 aa13.59□□□□□ -0.23
PARP1-201ENST00000366790 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
PARP1-201ENST00000366790 OLFM4Q6UX06 510 aa13.58□□□□□ -0.24
PARP1-201ENST00000366790 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
PARP1-201ENST00000366790 JMYQ8N9B5 988 aa13.58□□□□□ -0.24
PARP1-201ENST00000366790 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
PARP1-201ENST00000366790 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
PARP1-201ENST00000366790 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
PARP1-201ENST00000366790 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.24
PARP1-201ENST00000366790 FZD9O00144 591 aa13.57□□□□□ -0.24
PARP1-201ENST00000366790 ANXA1P04083 346 aa13.57□□□□□ -0.24
PARP1-201ENST00000366790 IARSP41252 1262 aaKnown RBP13.57□□□□□ -0.24
PARP1-201ENST00000366790 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
PARP1-201ENST00000366790 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
PARP1-201ENST00000366790 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
PARP1-201ENST00000366790 LAMB2P55268 1798 aa13.56□□□□□ -0.24
PARP1-201ENST00000366790 ZNF853P0CG23 659 aa13.56□□□□□ -0.24
PARP1-201ENST00000366790 TCIRG1Q13488 830 aa13.56□□□□□ -0.24
PARP1-201ENST00000366790 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
PARP1-201ENST00000366790 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
PARP1-201ENST00000366790 HTRA3P83110 453 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 TAF1DQ9H5J8 278 aaPredicted RBP13.55□□□□□ -0.24
PARP1-201ENST00000366790 CHPF2Q9P2E5 772 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
PARP1-201ENST00000366790 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
PARP1-201ENST00000366790 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 PCNTO95613 3336 aa13.55□□□□□ -0.24
PARP1-201ENST00000366790 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
PARP1-201ENST00000366790 CALD1Q05682 793 aaKnown RBP13.54□□□□□ -0.24
PARP1-201ENST00000366790 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
PARP1-201ENST00000366790 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 JDP2Q8WYK2 163 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 VPS33BQ9H267 617 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
PARP1-201ENST00000366790 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 GPC2Q8N158 579 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 COL4A5P29400 1685 aa13.53□□□□□ -0.24
PARP1-201ENST00000366790 APAF1O14727 1248 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 BBOX1O75936 387 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 GNAI1P63096 354 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
PARP1-201ENST00000366790 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
PARP1-201ENST00000366790 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 ABCC4O15439 1325 aa13.52□□□□□ -0.25
PARP1-201ENST00000366790 DDX60Q8IY21 1712 aaKnown RBP13.51□□□□□ -0.25
PARP1-201ENST00000366790 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
PARP1-201ENST00000366790 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
PARP1-201ENST00000366790 POTEJP0CG39 1038 aa13.51□□□□□ -0.25
PARP1-201ENST00000366790 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
PARP1-201ENST00000366790 TRIM28Q13263 835 aaKnown RBP13.51□□□□□ -0.25
PARP1-201ENST00000366790 SP8Q8IXZ3 490 aa13.51□□□□□ -0.25
PARP1-201ENST00000366790 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
PARP1-201ENST00000366790 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
PARP1-201ENST00000366790 HCLS1P14317 486 aaPredicted RBP13.5□□□□□ -0.25
PARP1-201ENST00000366790 EPHX2P34913 555 aa13.5□□□□□ -0.25
PARP1-201ENST00000366790 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
PARP1-201ENST00000366790 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
PARP1-201ENST00000366790 LARGE2Q8N3Y3 721 aa13.5□□□□□ -0.25
PARP1-201ENST00000366790 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
PARP1-201ENST00000366790 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
PARP1-201ENST00000366790 GRAPQ13588 217 aa13.49□□□□□ -0.25
PARP1-201ENST00000366790 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
PARP1-201ENST00000366790 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
PARP1-201ENST00000366790 LRRC37AA6NMS7 1700 aa13.49□□□□□ -0.25
PARP1-201ENST00000366790 TAF1P21675 1872 aa13.48□□□□□ -0.25
PARP1-201ENST00000366790 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
PARP1-201ENST00000366790 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
PARP1-201ENST00000366790 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
PARP1-201ENST00000366790 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
PARP1-201ENST00000366790 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
PARP1-201ENST00000366790 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
PARP1-201ENST00000366790 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
PARP1-201ENST00000366790 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
PARP1-201ENST00000366790 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
PARP1-201ENST00000366790 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
PARP1-201ENST00000366790 MPNDQ8N594 471 aa13.47□□□□□ -0.25
PARP1-201ENST00000366790 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
PARP1-201ENST00000366790 SCNN1DP51172 638 aa13.46□□□□□ -0.25
PARP1-201ENST00000366790 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms