RNA–Protein interactions for RNA: ENST00000361786.6

CIPC-201, Transcript of CLOCK interacting pacemaker, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIPC, Length 4,486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-201ENST00000361786 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
CIPC-201ENST00000361786 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
CIPC-201ENST00000361786 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
CIPC-201ENST00000361786 CTCFLQ8NI51 663 aaPredicted RBP16.09■□□□□ 0.17
CIPC-201ENST00000361786 TNMDQ9H2S6 317 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 PRR36Q9H6K5 1346 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 PLA2R1Q13018 1463 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 SBNO2Q9Y2G9 1366 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 GOLGA6L1Q8N7Z2 621 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 GOLGA8BA8MQT2 603 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 TIMM10P62072 90 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 MICU3Q86XE3 530 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 CFAP45Q9UL16 551 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 SLC12A7Q9Y666 1083 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
CIPC-201ENST00000361786 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.17
CIPC-201ENST00000361786 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.17
CIPC-201ENST00000361786 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.17
CIPC-201ENST00000361786 JAG2Q9Y219 1238 aa16.08■□□□□ 0.17
CIPC-201ENST00000361786 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
CIPC-201ENST00000361786 USP19O94966 1318 aa16.08■□□□□ 0.16
CIPC-201ENST00000361786 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
CIPC-201ENST00000361786 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.16
CIPC-201ENST00000361786 UBE2Q2Q8WVN8 375 aa16.08■□□□□ 0.16
CIPC-201ENST00000361786 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.16
CIPC-201ENST00000361786 TFCP2Q12800 502 aa16.08■□□□□ 0.16
CIPC-201ENST00000361786 ADGBQ8N7X0 1667 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 SMC2O95347 1197 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 CYP7A1P22680 504 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 SMC5Q8IY18 1101 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
CIPC-201ENST00000361786 PRDM15P57071 1507 aaPredicted RBP16.07■□□□□ 0.16
CIPC-201ENST00000361786 LDHCP07864 332 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
CIPC-201ENST00000361786 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 TBC1D32Q96NH3 1257 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 USP21Q9UK80 565 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
CIPC-201ENST00000361786 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 SH2B1Q9NRF2 756 aaPredicted RBP16.06■□□□□ 0.16
CIPC-201ENST00000361786 TSPY2A6NKD2 308 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
CIPC-201ENST00000361786 OFD1O75665 1012 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 BAG3O95817 575 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 SSFA2P28290 1259 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
CIPC-201ENST00000361786 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
CIPC-201ENST00000361786 BRF1Q92994 677 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 EPS15P42566 896 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 STX8Q9UNK0 236 aa16.06■□□□□ 0.16
CIPC-201ENST00000361786 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
CIPC-201ENST00000361786 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
CIPC-201ENST00000361786 TMEM67Q5HYA8 995 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 WASF1Q92558 559 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
CIPC-201ENST00000361786 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
CIPC-201ENST00000361786 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
CIPC-201ENST00000361786 CCDC192P0DO97 292 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 SPC24Q8NBT2 197 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 METTL22Q9BUU2 404 aaPredicted RBP16.04■□□□□ 0.16
CIPC-201ENST00000361786 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
CIPC-201ENST00000361786 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
CIPC-201ENST00000361786 ZNF76P36508 570 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
CIPC-201ENST00000361786 LETM1O95202 739 aaPredicted RBP16.04■□□□□ 0.16
CIPC-201ENST00000361786 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
CIPC-201ENST00000361786 KIAA0232Q92628 1395 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 NAP1L1P55209 391 aaKnown RBP16.03■□□□□ 0.16
CIPC-201ENST00000361786 CAMK4Q16566 473 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
CIPC-201ENST00000361786 HOXB7P09629 217 aa16.03■□□□□ 0.16
CIPC-201ENST00000361786 PNMA6EA0A0J9YXQ4 647 aa16.02■□□□□ 0.16
CIPC-201ENST00000361786 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.16
CIPC-201ENST00000361786 NYXQ9GZU5 481 aa16.02■□□□□ 0.16
CIPC-201ENST00000361786 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
CIPC-201ENST00000361786 PHKG2P15735 406 aa16.02■□□□□ 0.16
CIPC-201ENST00000361786 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms