RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 BMP2KLQ5H9B9 411 aa21.61■■□□□ 1.05
CLIP2-202ENST00000361545 YTHDC2Q9H6S0 1430 aaKnown RBP21.6■■□□□ 1.05
CLIP2-202ENST00000361545 TPTE2Q6XPS3 522 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 NCOA7Q8NI08 942 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 SCAND2PQ9GZW5 306 aaPredicted RBP21.6■■□□□ 1.05
CLIP2-202ENST00000361545 CFAP100Q494V2 611 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 TESK2Q96S53 571 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 GSTO1P78417 241 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 TMEM266Q2M3C6 531 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 RAB34Q9BZG1 259 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 SMTNL1A8MU46 457 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 KIF5BP33176 963 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 IP6K1Q92551 441 aa21.6■■□□□ 1.05
CLIP2-202ENST00000361545 HELBQ8NG08 1087 aaPredicted RBP21.59■■□□□ 1.05
CLIP2-202ENST00000361545 GRPEL1Q9HAV7 217 aa21.59■■□□□ 1.05
CLIP2-202ENST00000361545 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
CLIP2-202ENST00000361545 CCDC181Q5TID7 509 aa21.58■■□□□ 1.05
CLIP2-202ENST00000361545 SETQ01105 290 aaPredicted RBP21.58■■□□□ 1.05
CLIP2-202ENST00000361545 PICALMQ13492 652 aa21.58■■□□□ 1.05
CLIP2-202ENST00000361545 PPP4R3AQ6IN85 833 aa21.58■■□□□ 1.05
CLIP2-202ENST00000361545 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.05
CLIP2-202ENST00000361545 TRPM2O94759 1503 aa21.58■■□□□ 1.05
CLIP2-202ENST00000361545 PPP1R12BO60237 982 aaPredicted RBP21.58■■□□□ 1.05
CLIP2-202ENST00000361545 METAP2P50579 478 aaKnown RBP eCLIP21.58■■□□□ 1.05
CLIP2-202ENST00000361545 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.04
CLIP2-202ENST00000361545 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.04
CLIP2-202ENST00000361545 SLC4A4Q9Y6R1 1079 aa21.58■■□□□ 1.04
CLIP2-202ENST00000361545 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 OGFOD1Q8N543 542 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 LINS1Q8NG48 757 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 ORC3Q9UBD5 711 aaPredicted RBP21.57■■□□□ 1.04
CLIP2-202ENST00000361545 IRS4O14654 1257 aaPredicted RBP21.57■■□□□ 1.04
CLIP2-202ENST00000361545 SLC26A6Q9BXS9 759 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 LIG1P18858 919 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 GJB2P29033 226 aa21.57■■□□□ 1.04
CLIP2-202ENST00000361545 TFIP11Q9UBB9 837 aaKnown RBP21.57■■□□□ 1.04
CLIP2-202ENST00000361545 RNMTO43148 476 aaKnown RBP21.56■■□□□ 1.04
CLIP2-202ENST00000361545 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
CLIP2-202ENST00000361545 GNPATO15228 680 aa21.56■■□□□ 1.04
CLIP2-202ENST00000361545 SLC9C2Q5TAH2 1124 aa21.56■■□□□ 1.04
CLIP2-202ENST00000361545 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
CLIP2-202ENST00000361545 ATP8B2P98198 1209 aa21.56■■□□□ 1.04
CLIP2-202ENST00000361545 ERCC4Q92889 916 aaPredicted RBP21.56■■□□□ 1.04
CLIP2-202ENST00000361545 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 SDSP20132 328 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 DDX17Q92841 729 aaKnown RBP21.55■■□□□ 1.04
CLIP2-202ENST00000361545 LRRC2Q9BYS8 371 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 EHMT1Q9H9B1 1298 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 SSFA2P28290 1259 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 BRPF3Q9ULD4 1205 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 PCDHB15Q9Y5E8 787 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
CLIP2-202ENST00000361545 TCEANC2Q96MN5 208 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 HDAC9Q9UKV0 1011 aa21.55■■□□□ 1.04
CLIP2-202ENST00000361545 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
CLIP2-202ENST00000361545 TXLNBQ8N3L3 684 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 PUS7Q96PZ0 661 aaKnown RBP21.54■■□□□ 1.04
CLIP2-202ENST00000361545 SSR1P43307 286 aaKnown RBP21.54■■□□□ 1.04
CLIP2-202ENST00000361545 NUCB1Q02818 461 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 ZC3H12CQ9C0D7 883 aaKnown RBP21.54■■□□□ 1.04
CLIP2-202ENST00000361545 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 BRF1Q92994 677 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 PDE1AP54750 535 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 GDPD2Q9HCC8 539 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 GRM1Q13255 1194 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 ZGPATQ8N5A5 531 aaKnown RBP21.54■■□□□ 1.04
CLIP2-202ENST00000361545 TBC1D2Q9BYX2 928 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 HMG20BQ9P0W2 317 aa21.54■■□□□ 1.04
CLIP2-202ENST00000361545 MCM5P33992 734 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 ZNF804AQ7Z570 1209 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 RIMBP2O15034 1052 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 ZFYP08048 801 aaPredicted RBP21.53■■□□□ 1.04
CLIP2-202ENST00000361545 BAG4O95429 457 aaKnown RBP21.53■■□□□ 1.04
CLIP2-202ENST00000361545 WTAPQ15007 396 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 TNNQ9UQP3 1299 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
CLIP2-202ENST00000361545 RBM26Q5T8P6 1007 aaKnown RBP21.53■■□□□ 1.04
CLIP2-202ENST00000361545 CNNM3Q8NE01 707 aa21.53■■□□□ 1.04
CLIP2-202ENST00000361545 ATP10AO60312 1499 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 POLD1P28340 1107 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 JAG2Q9Y219 1238 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 CLEC11AQ9Y240 323 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 KLF18A0A0U1RQI7 1052 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 VAMP4O75379 141 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 HDAC1Q13547 482 aaPredicted RBP21.52■■□□□ 1.04
CLIP2-202ENST00000361545 C16orf71Q8IYS4 520 aaPredicted RBP21.52■■□□□ 1.04
CLIP2-202ENST00000361545 TSG101Q99816 390 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 EPB41L2O43491 1005 aaKnown RBP21.52■■□□□ 1.04
CLIP2-202ENST00000361545 NBPF14Q5TI25 921 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 IL27Q8NEV9 243 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 SAMM50Q9Y512 469 aa21.52■■□□□ 1.04
CLIP2-202ENST00000361545 CKAP2LQ8IYA6 745 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms