RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TRIM27P14373 513 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 ST5P78524 1137 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
NSMCE1-201ENST00000361439 ABCC4O15439 1325 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 NPHP1O15259 732 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 RIC1Q4ADV7 1423 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 PPP1R1BQ9UD71 204 aaPredicted RBP17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
NSMCE1-201ENST00000361439 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
NSMCE1-201ENST00000361439 PCCAP05165 728 aaPredicted RBP17.5■□□□□ 0.39
NSMCE1-201ENST00000361439 GCKRQ14397 625 aa17.5■□□□□ 0.39
NSMCE1-201ENST00000361439 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
NSMCE1-201ENST00000361439 SLC4A10Q6U841 1118 aa17.5■□□□□ 0.39
NSMCE1-201ENST00000361439 PDE6BP35913 854 aa17.49■□□□□ 0.39
NSMCE1-201ENST00000361439 TGFB2P61812 414 aa17.49■□□□□ 0.39
NSMCE1-201ENST00000361439 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
NSMCE1-201ENST00000361439 INTS3Q68E01 1043 aaKnown RBP17.49■□□□□ 0.39
NSMCE1-201ENST00000361439 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
NSMCE1-201ENST00000361439 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
NSMCE1-201ENST00000361439 SRCAPQ6ZRS2 3230 aa17.48■□□□□ 0.39
NSMCE1-201ENST00000361439 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
NSMCE1-201ENST00000361439 H7C1W4 665 aa17.47■□□□□ 0.39
NSMCE1-201ENST00000361439 DZIP1LQ8IYY4 767 aaKnown RBP17.47■□□□□ 0.39
NSMCE1-201ENST00000361439 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
NSMCE1-201ENST00000361439 UTYO14607 1347 aa17.47■□□□□ 0.39
NSMCE1-201ENST00000361439 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
NSMCE1-201ENST00000361439 GRM8O00222 908 aa17.46■□□□□ 0.39
NSMCE1-201ENST00000361439 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
NSMCE1-201ENST00000361439 ERFEQ4G0M1 354 aa17.46■□□□□ 0.39
NSMCE1-201ENST00000361439 HDAC5Q9UQL6 1122 aa17.46■□□□□ 0.39
NSMCE1-201ENST00000361439 NUTM1Q86Y26 1132 aa17.45■□□□□ 0.38
NSMCE1-201ENST00000361439 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
NSMCE1-201ENST00000361439 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
NSMCE1-201ENST00000361439 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 PLA2G12BQ9BX93 195 aa17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 FHDC1Q9C0D6 1143 aaPredicted RBP17.44■□□□□ 0.38
NSMCE1-201ENST00000361439 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
NSMCE1-201ENST00000361439 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
NSMCE1-201ENST00000361439 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 H0YIN7 160 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 PDE8AO60658 829 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 CASP7P55210 303 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
NSMCE1-201ENST00000361439 GNAI3P08754 354 aa17.41■□□□□ 0.38
NSMCE1-201ENST00000361439 SF3B3Q15393 1217 aaKnown RBP17.41■□□□□ 0.38
NSMCE1-201ENST00000361439 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
NSMCE1-201ENST00000361439 SRGNP10124 158 aa17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 NPR1P16066 1061 aa17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 SYNE4Q8N205 404 aa17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
NSMCE1-201ENST00000361439 PLIN1O60240 522 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 RLBP1P12271 317 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 ALDH1B1P30837 517 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 STYK1Q6J9G0 422 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
NSMCE1-201ENST00000361439 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 DPEP1P16444 411 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 CTSWP56202 376 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 TNNQ9UQP3 1299 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 LAMB2P55268 1798 aa17.38■□□□□ 0.37
NSMCE1-201ENST00000361439 ANKRD31Q8N7Z5 1873 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 CSF1RP07333 972 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 KCNA3P22001 575 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
NSMCE1-201ENST00000361439 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
NSMCE1-201ENST00000361439 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
NSMCE1-201ENST00000361439 NLGN2Q8NFZ4 835 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms