RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 RPAP1Q9BWH6 1393 aaPredicted RBP10.88□□□□□ -0.67
TOP1-201ENST00000361337 PTPRCP08575 1304 aa10.88□□□□□ -0.67
TOP1-201ENST00000361337 DDX58O95786 925 aaKnown RBP10.87□□□□□ -0.67
TOP1-201ENST00000361337 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 NEUROD6Q96NK8 337 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 NOLC1Q14978 699 aaKnown RBP eCLIP10.87□□□□□ -0.67
TOP1-201ENST00000361337 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 MYD88Q99836 296 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 LRRCC1Q9C099 1032 aa10.87□□□□□ -0.67
TOP1-201ENST00000361337 AATKQ6ZMQ8 1374 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 SKIDA1Q1XH10 827 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
TOP1-201ENST00000361337 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 KDM3BQ7LBC6 1761 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
TOP1-201ENST00000361337 COL18A1P39060 1754 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 FAM208AQ9UK61 1670 aaKnown RBP10.86□□□□□ -0.67
TOP1-201ENST00000361337 SBNO1A3KN83 1393 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 PAPPAQ13219 1627 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 SRGAP3O43295 1099 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 GNAI2P04899 355 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 IL2RBP14784 551 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 CWF19L2Q2TBE0 894 aaKnown RBP10.86□□□□□ -0.67
TOP1-201ENST00000361337 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 CRB1P82279 1406 aa10.86□□□□□ -0.67
TOP1-201ENST00000361337 FIBPO43427 364 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 COPS6Q7L5N1 327 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 TCHHQ07283 1943 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 PHF14O94880 888 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 LARGE1O95461 756 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 DDB1Q16531 1140 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 SPC24Q8NBT2 197 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 LRRFIP2Q9Y608 721 aaKnown RBP10.85□□□□□ -0.67
TOP1-201ENST00000361337 A1BGP04217 495 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
TOP1-201ENST00000361337 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
TOP1-201ENST00000361337 MCCP23508 829 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 MCM2P49736 904 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 ATP2B3Q16720 1220 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 CCDC24Q8N4L8 307 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 XAGE3Q8WTP9 111 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
TOP1-201ENST00000361337 CCDC94Q9BW85 323 aaPredicted RBP10.84□□□□□ -0.67
TOP1-201ENST00000361337 PPP1R1BQ9UD71 204 aaPredicted RBP10.84□□□□□ -0.67
TOP1-201ENST00000361337 PYCARDQ9ULZ3 195 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 MAP3K2Q9Y2U5 619 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 ZNF496Q96IT1 587 aaPredicted RBP10.84□□□□□ -0.67
TOP1-201ENST00000361337 KCNF1Q9H3M0 494 aa10.84□□□□□ -0.67
TOP1-201ENST00000361337 ZBTB22O15209 634 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 COL9A3Q14050 684 aaPredicted RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 ADGRL3Q9HAR2 1447 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 SYT1P21579 422 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 AK2P54819 239 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 RUFY3Q7L099 469 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
TOP1-201ENST00000361337 HSPA4P34932 840 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 ANAPC15P60006 121 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 CCDC183Q5T5S1 534 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
TOP1-201ENST00000361337 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 SNX14Q9Y5W7 946 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 ATP8B2P98198 1209 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 G3BP1Q13283 466 aaKnown RBP eCLIP10.82□□□□□ -0.681e-6■□□□□ 11.3
TOP1-201ENST00000361337 LTN1O94822 1766 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 ZSCAN22P10073 491 aaPredicted RBP10.82□□□□□ -0.68
TOP1-201ENST00000361337 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
TOP1-201ENST00000361337 SMIM5Q71RC9 77 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
TOP1-201ENST00000361337 KDM4AO75164 1064 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 ZNF526Q8TF50 670 aaPredicted RBP10.81□□□□□ -0.68
TOP1-201ENST00000361337 FMNL2Q96PY5 1086 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 STX6O43752 255 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 TTC14Q96N46 770 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 FUCA2Q9BTY2 467 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 USP44Q9H0E7 712 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 STAP2Q9UGK3 403 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 ERBB3P21860 1342 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 DNAAF4Q8WXU2 420 aa10.81□□□□□ -0.68
TOP1-201ENST00000361337 IFIT2P09913 472 aaKnown RBP10.8□□□□□ -0.68
TOP1-201ENST00000361337 PROSER3Q2NL68 480 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 ZNF790Q6PG37 636 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 CWC27Q6UX04 472 aaKnown RBP10.8□□□□□ -0.68
TOP1-201ENST00000361337 TMEM87AQ8NBN3 555 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 DBF4Q9UBU7 674 aaPredicted RBP10.8□□□□□ -0.68
TOP1-201ENST00000361337 A0A087WZG4 1122 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 ADCK5Q3MIX3 580 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 PI4K2BQ8TCG2 481 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms