RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TDRD12Q587J7 1177 aaKnown RBP23.5■■□□□ 1.35
CDC42BPB-201ENST00000361246 CCDC191Q8NCU4 936 aa23.5■■□□□ 1.35
CDC42BPB-201ENST00000361246 GDPD2Q9HCC8 539 aa23.5■■□□□ 1.35
CDC42BPB-201ENST00000361246 KIAA0586Q9BVV6 1533 aa23.5■■□□□ 1.35
CDC42BPB-201ENST00000361246 PRC1O43663 620 aa23.5■■□□□ 1.35
CDC42BPB-201ENST00000361246 FKBP15Q5T1M5 1219 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 GNPATO15228 680 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 RARSP54136 660 aaKnown RBP23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 MIGA1Q8NAN2 632 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 LDHCP07864 332 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 CALM1P0DP23 149 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 CALM2P0DP24 149 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 CALM3P0DP25 149 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 CNNM3Q8NE01 707 aa23.49■■□□□ 1.35
CDC42BPB-201ENST00000361246 SAP30BPQ9UHR5 308 aaKnown RBP23.48■■□□□ 1.35
CDC42BPB-201ENST00000361246 CTNNA2P26232 953 aa23.48■■□□□ 1.35
CDC42BPB-201ENST00000361246 TTF1Q15361 905 aaPredicted RBP23.48■■□□□ 1.35
CDC42BPB-201ENST00000361246 UTP14AQ9BVJ6 771 aaKnown RBP23.48■■□□□ 1.35
CDC42BPB-201ENST00000361246 RAB34Q9BZG1 259 aa23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 SMTNL1A8MU46 457 aa23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 LMOD1P29536 600 aaPredicted RBP23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 JDP2Q8WYK2 163 aa23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 CALML4Q96GE6 196 aa23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 METAP2P50579 478 aaKnown RBP eCLIP23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 SPA17Q15506 151 aa23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 NUP88Q99567 741 aaPredicted RBP23.47■■□□□ 1.35
CDC42BPB-201ENST00000361246 PKD2L1Q9P0L9 805 aa23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 MAP3K11Q16584 847 aa23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 RGS22Q8NE09 1264 aa23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 BCCIPQ9P287 314 aaKnown RBP eCLIP23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 BRPF3Q9ULD4 1205 aa23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
CDC42BPB-201ENST00000361246 CFAP65Q6ZU64 1925 aaKnown RBP23.45■■□□□ 1.35
CDC42BPB-201ENST00000361246 GSTO1P78417 241 aa23.45■■□□□ 1.34
CDC42BPB-201ENST00000361246 ARHGAP29Q52LW3 1261 aa23.45■■□□□ 1.34
CDC42BPB-201ENST00000361246 CHST3Q7LGC8 479 aa23.45■■□□□ 1.34
CDC42BPB-201ENST00000361246 NF2P35240 595 aa23.45■■□□□ 1.34
CDC42BPB-201ENST00000361246 TCEANC2Q96MN5 208 aa23.45■■□□□ 1.34
CDC42BPB-201ENST00000361246 MTIF2P46199 727 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 PRPF4BQ13523 1007 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 PA2G4Q9UQ80 394 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 NPHP3Q7Z494 1330 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 CCDC40Q4G0X9 1142 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 HSP90AA4PQ58FG1 418 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 PPIP5K1Q6PFW1 1433 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 ZNF804AQ7Z570 1209 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 TXLNBQ8N3L3 684 aa23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 ZC3H12CQ9C0D7 883 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-201ENST00000361246 KIF5BP33176 963 aa23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 EVI5LQ96CN4 794 aa23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 MPHOSPH6Q99547 160 aaKnown RBP23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 NAA16Q6N069 864 aaPredicted RBP23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 IL2RBP14784 551 aa23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 GJB2P29033 226 aa23.43■■□□□ 1.34
CDC42BPB-201ENST00000361246 TRIM27P14373 513 aa23.42■■□□□ 1.34
CDC42BPB-201ENST00000361246 IARSP41252 1262 aaKnown RBP23.42■■□□□ 1.34
CDC42BPB-201ENST00000361246 GSTTP1A0A1W2PQM5 241 aa23.42■■□□□ 1.34
CDC42BPB-201ENST00000361246 ZYXQ15942 572 aaKnown RBP23.42■■□□□ 1.34
CDC42BPB-201ENST00000361246 MSL1Q68DK7 614 aa23.42■■□□□ 1.34
CDC42BPB-201ENST00000361246 CCDC102AQ96A19 550 aa23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 NECAB1Q8N987 351 aa23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 TCP11L1Q9NUJ3 509 aa23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 FSIP1Q8NA03 581 aa23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 EAPPQ56P03 285 aaPredicted RBP23.41■■□□□ 1.34
CDC42BPB-201ENST00000361246 LMBR1LQ6UX01 489 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 RAB3GAP1Q15042 981 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 CETN2P41208 172 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 AFMP43652 599 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 LEKR1Q6ZMV7 388 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 WTAPQ15007 396 aa23.4■■□□□ 1.34
CDC42BPB-201ENST00000361246 TMCO5BA8MYB1 307 aa23.39■■□□□ 1.34
CDC42BPB-201ENST00000361246 ALDH1L2Q3SY69 923 aa23.39■■□□□ 1.33
CDC42BPB-201ENST00000361246 SYNCQ9H7C4 482 aa23.39■■□□□ 1.33
CDC42BPB-201ENST00000361246 ATP2B3Q16720 1220 aa23.39■■□□□ 1.33
CDC42BPB-201ENST00000361246 UIMC1Q96RL1 719 aa23.39■■□□□ 1.33
CDC42BPB-201ENST00000361246 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 NCOA7Q8NI08 942 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 CCDC148Q8NFR7 591 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 UBE4AQ14139 1066 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 ORC3Q9UBD5 711 aaPredicted RBP23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 PIK3R4Q99570 1358 aa23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 TRMT1Q9NXH9 659 aaKnown RBP23.38■■□□□ 1.33
CDC42BPB-201ENST00000361246 HMGB1P09429 215 aaKnown RBP23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 NOP2P46087 812 aaKnown RBP23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 PHACTR2O75167 634 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 EZRP15311 586 aaKnown RBP23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 LMAN1P49257 510 aa23.37■■□□□ 1.33
CDC42BPB-201ENST00000361246 SMARCC2Q8TAQ2 1214 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms