RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 PPP1R42Q7Z4L9 355 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 TMEM266Q2M3C6 531 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 ZSCAN23Q3MJ62 389 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 KDM5BQ9UGL1 1544 aa14.07□□□□□ -0.16
CCDC144A-204ENST00000360524 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 IL16Q14005 1332 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 LIG1P18858 919 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 JARID2Q92833 1246 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 STX6O43752 255 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 TRIM21P19474 475 aaKnown RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 HAND2P61296 217 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 GOLIM4O00461 696 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 SNRPA1P09661 255 aaKnown RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 LDHAL6AQ6ZMR3 332 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 CCDC94Q9BW85 323 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 ZSWIM4Q9H7M6 989 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 ATP5J2-PTCD1G3V325 749 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 C6orf229H3BNL8 230 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 UBE4AQ14139 1066 aa14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 TRMT1LQ7Z2T5 733 aaKnown RBP14.06□□□□□ -0.16
CCDC144A-204ENST00000360524 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 STX1AQ16623 288 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 DDX46Q7L014 1031 aaKnown RBP14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 EHMT1Q9H9B1 1298 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 CCDC194A0A1B0GVG4 234 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 MACROD2A1Z1Q3 448 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 YEATS4O95619 227 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 LDHCP07864 332 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 GIMAP6Q6P9H5 292 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 PAXBP1Q9Y5B6 917 aa14.05□□□□□ -0.16
CCDC144A-204ENST00000360524 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 NEMFO60524 1076 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 CEP135Q66GS9 1140 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 SPTY2D1Q68D10 685 aaPredicted RBP14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 CCDC91Q7Z6B0 441 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 GSTTP1A0A1W2PQM5 241 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 SCLT1Q96NL6 688 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 POTEB2H3BUK9 544 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 CTAGE5O15320 804 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
CCDC144A-204ENST00000360524 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 CTR9Q6PD62 1173 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 DNAI2Q9GZS0 605 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 WDHD1O75717 1129 aaPredicted RBP14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 ZNF608Q9ULD9 1512 aaPredicted RBP14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 ZBTB9Q96C00 473 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 BAG3O95817 575 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 HSP90AA4PQ58FG1 418 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 VAT1LQ9HCJ6 419 aa14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 DDX19AQ9NUU7 478 aaKnown RBP14.03□□□□□ -0.16
CCDC144A-204ENST00000360524 USO1O60763 962 aaKnown RBP14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 IVLP07476 585 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 ANAPC15P60006 121 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 RSPH14Q9UHP6 348 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 USP16Q9Y5T5 823 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 MSH6P52701 1360 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 RALGAPBQ86X10 1494 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 TTC22Q5TAA0 569 aa14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 CCDC12Q8WUD4 166 aaPredicted RBP14.02□□□□□ -0.16
CCDC144A-204ENST00000360524 RFC4P35249 363 aa14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 PDE4BQ07343 736 aa14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 HLTFQ14527 1009 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 KIF5BP33176 963 aa14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 TMEM67Q5HYA8 995 aa14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 PRPF4BQ13523 1007 aaKnown RBP14.02□□□□□ -0.17
CCDC144A-204ENST00000360524 IGSF3O75054 1194 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 KIF20AO95235 890 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 UQCRFS1P1P0C7P4 283 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 PAFAH1B1P43034 410 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 CETN2P41208 172 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 ST5P78524 1137 aa14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 CCDC97Q96F63 343 aaPredicted RBP14.01□□□□□ -0.17
CCDC144A-204ENST00000360524 MMRN2Q9H8L6 949 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms