RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CRACR2AQ9BSW2 395 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 IP6K1Q92551 441 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 LRP2BPQ9P2M1 347 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 ECHDC1Q9NTX5 307 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 RAI14Q9P0K7 980 aa14.16□□□□□ -0.14
DNMT1-202ENST00000359526 LRRFIP2Q9Y608 721 aaKnown RBP14.16□□□□□ -0.14
DNMT1-202ENST00000359526 UQCRFS1P1P0C7P4 283 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 TNNT1P13805 278 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 SPA17Q15506 151 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 CWC25Q9NXE8 425 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-202ENST00000359526 IDH1O75874 414 aaKnown RBP14.15□□□□□ -0.14
DNMT1-202ENST00000359526 GIMAP7Q8NHV1 300 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 BOLA2Q9H3K6 86 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 USP25Q9UHP3 1055 aa14.15□□□□□ -0.14
DNMT1-202ENST00000359526 RNF41Q9H4P4 317 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-202ENST00000359526 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-202ENST00000359526 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 KIF24Q5T7B8 1368 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 ANAPC15P60006 121 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 SEPT7Q16181 437 aaKnown RBP14.14□□□□□ -0.15
DNMT1-202ENST00000359526 DDB1Q16531 1140 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 MIS18AQ9NYP9 233 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 TET3O43151 1660 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
DNMT1-202ENST00000359526 FLIIQ13045 1269 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 METTL24Q5JXM2 366 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 FKBP15Q5T1M5 1219 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 EHMT1Q9H9B1 1298 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 FAM193AP78312 1265 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 TIGD1Q96MW7 591 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 DNAI2Q9GZS0 605 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 ZHX3Q9H4I2 956 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 ADAMTS2O95450 1211 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 PAXBP1Q9Y5B6 917 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 NCKAP5LQ9HCH0 1330 aa14.14□□□□□ -0.15
DNMT1-202ENST00000359526 GJB2P29033 226 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
DNMT1-202ENST00000359526 CENPHQ9H3R5 247 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 ADCY5O95622 1261 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 MAP3K12Q12852 859 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 ZSCAN16Q9H4T2 348 aaPredicted RBP14.13□□□□□ -0.15
DNMT1-202ENST00000359526 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 NEFHP12036 1026 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
DNMT1-202ENST00000359526 KDM6BO15054 1643 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 SHTN1A0MZ66 631 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 PLEKHG3A1L390 1219 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 URI1O94763 535 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-202ENST00000359526 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 FAM135BQ49AJ0 1406 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 CCDC150Q8NCX0 1101 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
DNMT1-202ENST00000359526 DDX46Q7L014 1031 aaKnown RBP14.12□□□□□ -0.15
DNMT1-202ENST00000359526 ZNF213O14771 459 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 TSG101Q99816 390 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 MYD88Q99836 296 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 FAM107BQ9H098 131 aa14.12□□□□□ -0.15
DNMT1-202ENST00000359526 RFC4P35249 363 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 NAPBQ9H115 298 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 XRCC6P12956 609 aaKnown RBP eCLIP14.11□□□□□ -0.15
DNMT1-202ENST00000359526 TMEM132AQ24JP5 1023 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 KANK3Q6NY19 840 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 GPATCH11Q8N954 259 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 MBIPQ9NS73 344 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 KDM5AP29375 1690 aaKnown RBP14.11□□□□□ -0.15
DNMT1-202ENST00000359526 F6X3S4 739 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 SSRP1Q08945 709 aaKnown RBP14.11□□□□□ -0.15
DNMT1-202ENST00000359526 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 POLR3GO15318 223 aaPredicted RBP14.11□□□□□ -0.15
DNMT1-202ENST00000359526 POLD1P28340 1107 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 GTF2F1P35269 517 aaKnown RBP eCLIP14.11□□□□□ -0.15
DNMT1-202ENST00000359526 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 CERS3Q8IU89 383 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
DNMT1-202ENST00000359526 YEATS4O95619 227 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 CCDC171Q6TFL3 1326 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 YEATS2Q9ULM3 1422 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 USO1O60763 962 aaKnown RBP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 KIF20AO95235 890 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 CTCFLQ8NI51 663 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 RAB34Q9BZG1 259 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 TUBB4AP04350 444 aa14.1□□□□□ -0.15
DNMT1-202ENST00000359526 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
DNMT1-202ENST00000359526 CKAP2LQ8IYA6 745 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms