RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 NUP98P52948 1817 aa17.32■□□□□ 0.36
PDLIM5-203ENST00000359265 TOMM70O94826 608 aa17.31■□□□□ 0.36
PDLIM5-203ENST00000359265 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-203ENST00000359265 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
PDLIM5-203ENST00000359265 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
PDLIM5-203ENST00000359265 HMMRO75330 724 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 ITPK1Q13572 414 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
PDLIM5-203ENST00000359265 CNTNAP4Q9C0A0 1308 aa17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 MYD88Q99836 296 aa17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
PDLIM5-203ENST00000359265 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 CWF19L2Q2TBE0 894 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 PCNTO95613 3336 aa17.28■□□□□ 0.36
PDLIM5-203ENST00000359265 NEURL1BA8MQ27 555 aa17.27■□□□□ 0.36
PDLIM5-203ENST00000359265 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
PDLIM5-203ENST00000359265 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
PDLIM5-203ENST00000359265 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
PDLIM5-203ENST00000359265 UTYO14607 1347 aa17.26■□□□□ 0.35
PDLIM5-203ENST00000359265 GRM8O00222 908 aa17.26■□□□□ 0.35
PDLIM5-203ENST00000359265 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
PDLIM5-203ENST00000359265 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
PDLIM5-203ENST00000359265 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
PDLIM5-203ENST00000359265 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-203ENST00000359265 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
PDLIM5-203ENST00000359265 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-203ENST00000359265 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
PDLIM5-203ENST00000359265 CD2APQ9Y5K6 639 aa17.25■□□□□ 0.35
PDLIM5-203ENST00000359265 MAP3K15Q6ZN16 1313 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 RGS3P49796 1198 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 GCKRQ14397 625 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 PCDH10Q9P2E7 1040 aa17.24■□□□□ 0.35
PDLIM5-203ENST00000359265 MYH3P11055 1940 aa17.23■□□□□ 0.35
PDLIM5-203ENST00000359265 A0A087WZG4 1122 aa17.23■□□□□ 0.35
PDLIM5-203ENST00000359265 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
PDLIM5-203ENST00000359265 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
PDLIM5-203ENST00000359265 COL15A1P39059 1388 aa17.23■□□□□ 0.35
PDLIM5-203ENST00000359265 EIF5P55010 431 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-203ENST00000359265 NUCB1Q02818 461 aa17.22■□□□□ 0.35
PDLIM5-203ENST00000359265 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
PDLIM5-203ENST00000359265 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
PDLIM5-203ENST00000359265 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
PDLIM5-203ENST00000359265 UBR3Q6ZT12 1888 aa17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 AK7Q96M32 723 aa17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
PDLIM5-203ENST00000359265 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 GNPATO15228 680 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 MTX1Q13505 466 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
PDLIM5-203ENST00000359265 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 POLA2Q14181 598 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 SSH3Q8TE77 659 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 LAMB2P55268 1798 aa17.19■□□□□ 0.34
PDLIM5-203ENST00000359265 HSPA1AP0DMV8 641 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 HSPA1BP0DMV9 641 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
PDLIM5-203ENST00000359265 RGL2O15211 777 aa17.17■□□□□ 0.34
PDLIM5-203ENST00000359265 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
PDLIM5-203ENST00000359265 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-203ENST00000359265 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
PDLIM5-203ENST00000359265 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-203ENST00000359265 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
PDLIM5-203ENST00000359265 H7C1W4 665 aa17.15■□□□□ 0.34
PDLIM5-203ENST00000359265 PDE4AP27815 886 aa17.15■□□□□ 0.34
PDLIM5-203ENST00000359265 CASP7P55210 303 aa17.15■□□□□ 0.34
PDLIM5-203ENST00000359265 HLFQ16534 295 aa17.15■□□□□ 0.34
PDLIM5-203ENST00000359265 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
PDLIM5-203ENST00000359265 SSFA2P28290 1259 aa17.14■□□□□ 0.33
PDLIM5-203ENST00000359265 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms