RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PTPRMP28827 1452 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 TPD52L1Q16890 204 aaPredicted RBP14.44□□□□□ -0.1
COL20A1-201ENST00000358894 FILIP1Q7Z7B0 1213 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 NEK1Q96PY6 1258 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 IGSF1Q8N6C5 1336 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 DHX16O60231 1041 aaKnown RBP14.43□□□□□ -0.1
COL20A1-201ENST00000358894 HAND2P61296 217 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 SSH3Q8TE77 659 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 CREB3L3Q68CJ9 461 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 DDX21Q9NR30 783 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL20A1-201ENST00000358894 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 CGNQ9P2M7 1197 aaKnown RBP14.43□□□□□ -0.1
COL20A1-201ENST00000358894 NRXN1Q9ULB1 1477 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 NEXMIFQ5QGS0 1516 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 ERICH2A1L162 156 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 SMC2O95347 1197 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 NDUFB9Q9Y6M9 179 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
COL20A1-201ENST00000358894 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
COL20A1-201ENST00000358894 GPTP24298 496 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 NAT10Q9H0A0 1025 aaKnown RBP14.42□□□□□ -0.1
COL20A1-201ENST00000358894 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 TPM3P06753 285 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 SAFBQ15424 915 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL20A1-201ENST00000358894 METTL24Q5JXM2 366 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 FSD2A1L4K1 749 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 CCDC66A2RUB6 948 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 RAD50Q92878 1312 aa14.42□□□□□ -0.1
COL20A1-201ENST00000358894 SUCLG2Q96I99 432 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 ERICH4A6NGS2 130 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 PES1O00541 588 aaKnown RBP14.41□□□□□ -0.1
COL20A1-201ENST00000358894 GADD45BO75293 160 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-201ENST00000358894 HMGN5P82970 282 aaKnown RBP14.41□□□□□ -0.1
COL20A1-201ENST00000358894 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL20A1-201ENST00000358894 BABAM1Q9NWV8 329 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 ARHGEF40Q8TER5 1519 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 CAMSAP1Q5T5Y3 1602 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 IBTKQ9P2D0 1353 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-201ENST00000358894 HSPA4P34932 840 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 CTNNA3Q9UI47 895 aa14.41□□□□□ -0.1
COL20A1-201ENST00000358894 MROH2AA6NES4 1674 aa14.4□□□□□ -0.1
COL20A1-201ENST00000358894 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
COL20A1-201ENST00000358894 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
COL20A1-201ENST00000358894 CWC25Q9NXE8 425 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-201ENST00000358894 TFCP2Q12800 502 aa14.4□□□□□ -0.1
COL20A1-201ENST00000358894 TTC12Q9H892 705 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-201ENST00000358894 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
COL20A1-201ENST00000358894 EDC3Q96F86 508 aaKnown RBP14.4□□□□□ -0.1
COL20A1-201ENST00000358894 HOXB7P09629 217 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 ZNF445P59923 1031 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 PROSER3Q2NL68 480 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 TMOD3Q9NYL9 352 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 BRD1O95696 1058 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
COL20A1-201ENST00000358894 BEND3Q5T5X7 828 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 KIF2CQ99661 725 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 OSBPL3Q9H4L5 887 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 HMG20BQ9P0W2 317 aa14.39□□□□□ -0.11
COL20A1-201ENST00000358894 IFIT5Q13325 482 aaKnown RBP14.38□□□□□ -0.11
COL20A1-201ENST00000358894 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 MPHOSPH8Q99549 860 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 DACT1Q9NYF0 836 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 ZKSCAN5Q9Y2L8 839 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 MED14O60244 1454 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 CCDC129Q6ZRS4 1044 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 Q6ZUG5 572 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 CHST3Q7LGC8 479 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 PLEKHG1Q9ULL1 1385 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 DIP2CQ9Y2E4 1556 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
COL20A1-201ENST00000358894 GPT2Q8TD30 523 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 MTMR7Q9Y216 660 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 VWDEQ8N2E2 1590 aa14.38□□□□□ -0.11
COL20A1-201ENST00000358894 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 PDCL2Q8N4E4 241 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 AOX1Q06278 1338 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 PTH1RQ03431 593 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
COL20A1-201ENST00000358894 ZNF165P49910 485 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 CEP57L1Q8IYX8 460 aa14.37□□□□□ -0.11
COL20A1-201ENST00000358894 STARD3NLO95772 234 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 TIMM10P62072 90 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 SART3Q15020 963 aaKnown RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 NUP133Q8WUM0 1156 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 C8orf76Q96K31 380 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 DBNDD2Q9BQY9 259 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms