RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SWAP70Q9UH65 585 aa10.05□□□□□ -0.8
COL6A6-201ENST00000358511 KDM5AP29375 1690 aaKnown RBP10.05□□□□□ -0.8
COL6A6-201ENST00000358511 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
COL6A6-201ENST00000358511 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
COL6A6-201ENST00000358511 MAP2K2P36507 400 aa10.05□□□□□ -0.8
COL6A6-201ENST00000358511 FBF1Q8TES7 1133 aa10.05□□□□□ -0.8
COL6A6-201ENST00000358511 PPP1R1BQ9UD71 204 aaPredicted RBP10.05□□□□□ -0.8
COL6A6-201ENST00000358511 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 MATR3P43243 847 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL6A6-201ENST00000358511 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
COL6A6-201ENST00000358511 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 PSME1Q06323 249 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
COL6A6-201ENST00000358511 BIVM-ERCC5R4GMW8 1640 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 CFAP70Q5T0N1 1121 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 SULT6B1Q6IMI4 303 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 HOOK3Q86VS8 718 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 TMEM132EQ6IEE7 984 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 EPRSP07814 1512 aaKnown RBP10.04□□□□□ -0.8
COL6A6-201ENST00000358511 ZEB2O60315 1214 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 ATP2C2O75185 946 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 F13A1P00488 732 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 ARHGAP25P42331 645 aa10.04□□□□□ -0.8
COL6A6-201ENST00000358511 SYKP43405 635 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 DAAM2Q86T65 1068 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 IKQ13123 557 aaPredicted RBP10.03□□□□□ -0.8
COL6A6-201ENST00000358511 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
COL6A6-201ENST00000358511 NSD2O96028 1365 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 UTP14CQ5TAP6 766 aaKnown RBP10.03□□□□□ -0.8
COL6A6-201ENST00000358511 AOPEPQ8N6M6 819 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 CCDC129Q6ZRS4 1044 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
COL6A6-201ENST00000358511 DNAJC25Q9H1X3 360 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 PHACTR2O75167 634 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 GCC2Q8IWJ2 1684 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 INPP5BP32019 993 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 CYLC1P35663 651 aaPredicted RBP10.03□□□□□ -0.8
COL6A6-201ENST00000358511 RASAL2Q9UJF2 1139 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 ARFGAP2Q8N6H7 521 aa10.03□□□□□ -0.8
COL6A6-201ENST00000358511 RTL1A6NKG5 1358 aa10.02□□□□□ -0.8
COL6A6-201ENST00000358511 KRT86O43790 486 aa10.02□□□□□ -0.8
COL6A6-201ENST00000358511 ZNF500O60304 480 aaPredicted RBP10.02□□□□□ -0.8
COL6A6-201ENST00000358511 PPP2R3AQ06190 1150 aa10.02□□□□□ -0.8
COL6A6-201ENST00000358511 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.8
COL6A6-201ENST00000358511 CLNS1AP54105 237 aaKnown RBP10.02□□□□□ -0.8
COL6A6-201ENST00000358511 NPHP3Q7Z494 1330 aa10.02□□□□□ -0.8
COL6A6-201ENST00000358511 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 SSBP05455 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL6A6-201ENST00000358511 SETSIPP0DME0 302 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 DACT1Q9NYF0 836 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 EVCP57679 992 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 VAV2P52735 878 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
COL6A6-201ENST00000358511 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.81
COL6A6-201ENST00000358511 IL16Q14005 1332 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 N4BP3O15049 544 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 ATP11AP98196 1134 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 ELF2Q15723 593 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 RAB34Q9BZG1 259 aa10.02□□□□□ -0.81
COL6A6-201ENST00000358511 MTIF2P46199 727 aaKnown RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 A0A1W2PRG0 241 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 ANKRD18BA2A2Z9 1011 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 TUBB2AQ13885 445 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 IFT74Q96LB3 600 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 TUBB2BQ9BVA1 445 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 BUB1BO60566 1050 aaPredicted RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 DNM1Q05193 864 aaKnown RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 TMEM87AQ8NBN3 555 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 FMNL3Q8IVF7 1028 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 SELENOOQ9BVL4 669 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 SYT10Q6XYQ8 523 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 RMND1Q9NWS8 449 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 SDSP20132 328 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 EVA1CP58658 441 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 TSGA10Q9BZW7 698 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
COL6A6-201ENST00000358511 CHMP4BP1P59074 171 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
COL6A6-201ENST00000358511 SLC12A7Q9Y666 1083 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 KRT83P78385 493 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 GUCY1B3Q02153 619 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 KIAA0753Q2KHM9 967 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 RBSNQ9H1K0 784 aa10□□□□□ -0.81
COL6A6-201ENST00000358511 TMCO5BA8MYB1 307 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms