RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CREB3L3Q68CJ9 461 aa21.09■□□□□ 0.97
RTN4-204ENST00000357732 RBM8AQ9Y5S9 174 aaKnown RBP21.09■□□□□ 0.97
RTN4-204ENST00000357732 ZNF530Q6P9A1 599 aaPredicted RBP21.08■□□□□ 0.97
RTN4-204ENST00000357732 MPRIPQ6WCQ1 1025 aa21.08■□□□□ 0.97
RTN4-204ENST00000357732 LINS1Q8NG48 757 aa21.08■□□□□ 0.97
RTN4-204ENST00000357732 HMG20BQ9P0W2 317 aa21.08■□□□□ 0.97
RTN4-204ENST00000357732 JCADQ9P266 1359 aa21.08■□□□□ 0.97
RTN4-204ENST00000357732 MRC1P22897 1456 aa21.08■□□□□ 0.96
RTN4-204ENST00000357732 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.96
RTN4-204ENST00000357732 MAP3K2Q9Y2U5 619 aa21.08■□□□□ 0.96
RTN4-204ENST00000357732 PSME1Q06323 249 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 TSGA10IPQ3SY00 556 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 ST3GAL1Q11201 340 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 ESCO1Q5FWF5 840 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
RTN4-204ENST00000357732 AACSQ86V21 672 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 FAM200AQ8TCP9 573 aa21.07■□□□□ 0.96
RTN4-204ENST00000357732 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
RTN4-204ENST00000357732 DDX58O95786 925 aaKnown RBP21.06■□□□□ 0.96
RTN4-204ENST00000357732 CPA1P15085 419 aa21.06■□□□□ 0.96
RTN4-204ENST00000357732 PKNOX2Q96KN3 472 aa21.06■□□□□ 0.96
RTN4-204ENST00000357732 GIGYF1O75420 1035 aaPredicted RBP21.05■□□□□ 0.96
RTN4-204ENST00000357732 MAP3K11Q16584 847 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 TTC12Q9H892 705 aaPredicted RBP21.05■□□□□ 0.96
RTN4-204ENST00000357732 KCNJ4P48050 445 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 KIAA1524Q8TCG1 905 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 CAMTA1Q9Y6Y1 1673 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 MED23Q9ULK4 1368 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 ADAMTS7Q9UKP4 1686 aa21.05■□□□□ 0.96
RTN4-204ENST00000357732 GRM8O00222 908 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 SLC27A2O14975 620 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
RTN4-204ENST00000357732 G3BP1Q13283 466 aaKnown RBP eCLIP21.04■□□□□ 0.963e-16■□□□□ 9.4
RTN4-204ENST00000357732 LARP6Q9BRS8 491 aaKnown RBP21.04■□□□□ 0.96
RTN4-204ENST00000357732 NUP62CLQ9H1M0 184 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 SIPA1L3O60292 1781 aaPredicted RBP21.04■□□□□ 0.96
RTN4-204ENST00000357732 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 BLOC1S2Q6QNY1 142 aa21.04■□□□□ 0.96
RTN4-204ENST00000357732 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
RTN4-204ENST00000357732 SETD1BQ9UPS6 1966 aaKnown RBP21.04■□□□□ 0.96
RTN4-204ENST00000357732 RGPD2P0DJD1 1756 aa21.03■□□□□ 0.96
RTN4-204ENST00000357732 NPHP4O75161 1426 aaPredicted RBP21.03■□□□□ 0.96
RTN4-204ENST00000357732 NMIQ13287 307 aaPredicted RBP21.03■□□□□ 0.96
RTN4-204ENST00000357732 KRT32Q14532 448 aa21.03■□□□□ 0.96
RTN4-204ENST00000357732 CAVIN2O95810 425 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 RPS6KB1P23443 525 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 CHAF1AQ13111 956 aaPredicted RBP21.02■□□□□ 0.96
RTN4-204ENST00000357732 RBM43Q6ZSC3 357 aaKnown RBP21.02■□□□□ 0.96
RTN4-204ENST00000357732 TTC6Q86TZ1 520 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 ZNF830Q96NB3 372 aaPredicted RBP21.02■□□□□ 0.96
RTN4-204ENST00000357732 CCDC94Q9BW85 323 aaPredicted RBP21.02■□□□□ 0.96
RTN4-204ENST00000357732 KIF3AQ9Y496 699 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 PXDNQ92626 1479 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 PROSER3Q2NL68 480 aa21.02■□□□□ 0.96
RTN4-204ENST00000357732 SMAP1Q8IYB5 467 aaPredicted RBP21.02■□□□□ 0.96
RTN4-204ENST00000357732 SASH1O94885 1247 aa21.01■□□□□ 0.95
RTN4-204ENST00000357732 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.954e-6■■■■□ 21
RTN4-204ENST00000357732 PA2G4Q9UQ80 394 aaKnown RBP21.01■□□□□ 0.95
RTN4-204ENST00000357732 PRAMEF22A3QJZ6 481 aa21■□□□□ 0.95
RTN4-204ENST00000357732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21■□□□□ 0.95
RTN4-204ENST00000357732 EAF2Q96CJ1 260 aaPredicted RBP21■□□□□ 0.95
RTN4-204ENST00000357732 SLIT3O75094 1523 aa21■□□□□ 0.95
RTN4-204ENST00000357732 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
RTN4-204ENST00000357732 ANKLE2Q86XL3 938 aa21■□□□□ 0.95
RTN4-204ENST00000357732 FAM227BQ96M60 508 aa21■□□□□ 0.95
RTN4-204ENST00000357732 TYRO3Q06418 890 aa20.99■□□□□ 0.95
RTN4-204ENST00000357732 CDC37L1Q7L3B6 337 aa20.99■□□□□ 0.95
RTN4-204ENST00000357732 NECAB1Q8N987 351 aa20.99■□□□□ 0.95
RTN4-204ENST00000357732 SUCLG2Q96I99 432 aa20.99■□□□□ 0.95
RTN4-204ENST00000357732 FSD1Q9BTV5 496 aa20.99■□□□□ 0.95
RTN4-204ENST00000357732 GOLGA6L4A6NEF3 574 aa20.98■□□□□ 0.95
RTN4-204ENST00000357732 GCP02774 474 aa20.98■□□□□ 0.95
RTN4-204ENST00000357732 CWF19L2Q2TBE0 894 aaKnown RBP20.98■□□□□ 0.95
RTN4-204ENST00000357732 KAZALD1Q96I82 304 aa20.98■□□□□ 0.95
RTN4-204ENST00000357732 TNMDQ9H2S6 317 aa20.98■□□□□ 0.95
RTN4-204ENST00000357732 BICC1Q9H694 974 aaKnown RBP20.98■□□□□ 0.95
RTN4-204ENST00000357732 MRVI1Q9Y6F6 885 aa20.98■□□□□ 0.95
RTN4-204ENST00000357732 AP5Z1O43299 807 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 SPATA32Q96LK8 384 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 KCNF1Q9H3M0 494 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 ORAI2Q96SN7 254 aa20.97■□□□□ 0.95
RTN4-204ENST00000357732 A0A0D9SFI3 127 aa20.96■□□□□ 0.95
RTN4-204ENST00000357732 PLCB2Q00722 1185 aa20.96■□□□□ 0.95
RTN4-204ENST00000357732 TOB2Q14106 344 aaPredicted RBP20.96■□□□□ 0.95
RTN4-204ENST00000357732 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
RTN4-204ENST00000357732 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
RTN4-204ENST00000357732 CLSTN2Q9H4D0 955 aa20.96■□□□□ 0.95
RTN4-204ENST00000357732 COL15A1P39059 1388 aa20.96■□□□□ 0.95
RTN4-204ENST00000357732 ZSCAN16Q9H4T2 348 aaPredicted RBP20.95■□□□□ 0.94
RTN4-204ENST00000357732 LIG1P18858 919 aa20.95■□□□□ 0.94
RTN4-204ENST00000357732 LMOD2Q6P5Q4 547 aa20.95■□□□□ 0.94
RTN4-204ENST00000357732 TDRD7Q8NHU6 1098 aaKnown RBP20.95■□□□□ 0.94
RTN4-204ENST00000357732 LEO1Q8WVC0 666 aaPredicted RBP20.95■□□□□ 0.94
RTN4-204ENST00000357732 NEXNQ0ZGT2 675 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms