RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 ATRNO75882 1429 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 ERBB3P21860 1342 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 WDR17Q8IZU2 1322 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 SYT1P21579 422 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
CAPN3-205ENST00000357568 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 USP21Q9UK80 565 aa12.69□□□□□ -0.38
CAPN3-205ENST00000357568 CAVIN2O95810 425 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 EVA1CP58658 441 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 VPS72Q15906 364 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 HSP90AB2PQ58FF8 381 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 TCHHQ07283 1943 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 TSC1Q92574 1164 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 SMC3Q9UQE7 1217 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
CAPN3-205ENST00000357568 SGSM2O43147 1006 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 KCNB2Q92953 911 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 ARID3AQ99856 593 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 MORC2Q9Y6X9 1032 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 APBB1O00213 710 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 CDC25BP30305 580 aa12.67□□□□□ -0.38
CAPN3-205ENST00000357568 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 C17orf53Q8N3J3 647 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-205ENST00000357568 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 RBM43Q6ZSC3 357 aaKnown RBP12.66□□□□□ -0.38
CAPN3-205ENST00000357568 SNX14Q9Y5W7 946 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
CAPN3-205ENST00000357568 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 AP5Z1O43299 807 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-205ENST00000357568 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 MTMR6Q9Y217 621 aa12.66□□□□□ -0.38
CAPN3-205ENST00000357568 THRAP3Q9Y2W1 955 aaKnown RBP12.66□□□□□ -0.38
CAPN3-205ENST00000357568 NEMFO60524 1076 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
CAPN3-205ENST00000357568 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN3-205ENST00000357568 AK2P54819 239 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
CAPN3-205ENST00000357568 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.39
CAPN3-205ENST00000357568 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.39
CAPN3-205ENST00000357568 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.39
CAPN3-205ENST00000357568 RUFY3Q7L099 469 aa12.65□□□□□ -0.39
CAPN3-205ENST00000357568 TDRD7Q8NHU6 1098 aaKnown RBP12.65□□□□□ -0.39
CAPN3-205ENST00000357568 STRN4Q9NRL3 753 aa12.65□□□□□ -0.39
CAPN3-205ENST00000357568 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
CAPN3-205ENST00000357568 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
CAPN3-205ENST00000357568 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 KCND1Q9NSA2 647 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 DDX19AQ9NUU7 478 aaKnown RBP12.64□□□□□ -0.39
CAPN3-205ENST00000357568 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
CAPN3-205ENST00000357568 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
CAPN3-205ENST00000357568 GLI3P10071 1580 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 FIBPO43427 364 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 FAM53CQ9NYF3 392 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 PDCP20941 246 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 KRT85P78386 507 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 TYRO3Q06418 890 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 BARGINQ6ZT62 677 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
CAPN3-205ENST00000357568 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-205ENST00000357568 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-205ENST00000357568 STK31Q9BXU1 1019 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
CAPN3-205ENST00000357568 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 ZNF75DP51815 510 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 POLA2Q14181 598 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
CAPN3-205ENST00000357568 IPO4Q8TEX9 1081 aaKnown RBP12.62□□□□□ -0.39
CAPN3-205ENST00000357568 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms