RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PPP2R5CQ13362 524 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 MCM4P33991 863 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 TAF12Q16514 161 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 CAPZA3Q96KX2 299 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 STX6O43752 255 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 CALM1P0DP23 149 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 CALM2P0DP24 149 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 CALM3P0DP25 149 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
FXR1-202ENST00000357559 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
FXR1-202ENST00000357559 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 PICALMQ13492 652 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 RASA3Q14644 834 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 SP4Q02446 784 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 AAMPQ13685 434 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
FXR1-202ENST00000357559 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 F6X3S4 739 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 TBCAO75347 108 aaKnown RBP12.06□□□□□ -0.48
FXR1-202ENST00000357559 GOLIM4O00461 696 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 GJB2P29033 226 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 UAP1Q16222 522 aaPredicted RBP12.06□□□□□ -0.48
FXR1-202ENST00000357559 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 MRRFQ96E11 262 aaKnown RBP12.06□□□□□ -0.48
FXR1-202ENST00000357559 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
FXR1-202ENST00000357559 MX1P20591 662 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 HAUS7Q99871 368 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 ADCY5O95622 1261 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 HSPA4P34932 840 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 AMPD3Q01432 767 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
FXR1-202ENST00000357559 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 FAM170AA1A519 330 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 SNX16P57768 344 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 PLCB3Q01970 1234 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 CKAP4Q07065 602 aaKnown RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 RSPH14Q9UHP6 348 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 CRCPO75575 148 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 CWC25Q9NXE8 425 aaPredicted RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 MCM6Q14566 821 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
FXR1-202ENST00000357559 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 GNG11P61952 73 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 CALCOCO1Q9P1Z2 691 aa12.05□□□□□ -0.48
FXR1-202ENST00000357559 SSFA2P28290 1259 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 ATRIPQ8WXE1 791 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 KIF1BPQ96EK5 621 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 STAT6P42226 847 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 GTF2A1P52655 376 aaPredicted RBP12.04□□□□□ -0.48
FXR1-202ENST00000357559 STX1AQ16623 288 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
FXR1-202ENST00000357559 BRD4O60885 1362 aaPredicted RBP12.04□□□□□ -0.48
FXR1-202ENST00000357559 STXBP4Q6ZWJ1 553 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 CLSTN2Q9H4D0 955 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
FXR1-202ENST00000357559 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 RTEL1-TNFRSF6BF6WH68 1400 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 CABP5Q9NP86 173 aa12.04□□□□□ -0.48
FXR1-202ENST00000357559 UBA7P41226 1012 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 CFAP157Q5JU67 520 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 KCNK9Q9NPC2 374 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.03□□□□□ -0.48
FXR1-202ENST00000357559 C16orf71Q8IYS4 520 aaPredicted RBP12.03□□□□□ -0.48
FXR1-202ENST00000357559 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 TCHPQ9BT92 498 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 PPANQ9NQ55 473 aaKnown RBP12.03□□□□□ -0.48
FXR1-202ENST00000357559 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
FXR1-202ENST00000357559 PPP2R5DQ14738 602 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 RPGRIP1LQ68CZ1 1315 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 SMC6Q96SB8 1091 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 TXNDC16Q9P2K2 825 aa12.03□□□□□ -0.48
FXR1-202ENST00000357559 KIF2AO00139 706 aaPredicted RBP12.02□□□□□ -0.48
FXR1-202ENST00000357559 NBPF1Q3BBV0 1214 aa12.02□□□□□ -0.48
FXR1-202ENST00000357559 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.48
FXR1-202ENST00000357559 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.48
FXR1-202ENST00000357559 BIN2Q9UBW5 565 aaPredicted RBP12.02□□□□□ -0.48
FXR1-202ENST00000357559 PPP1R21Q6ZMI0 780 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 MFSD6Q6ZSS7 791 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms