RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 PTH1RQ03431 593 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 KMT5BQ4FZB7 885 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
SMARCAL1-201ENST00000357276 MYH15Q9Y2K3 1946 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 CAMK4Q16566 473 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 CDC37L1Q7L3B6 337 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 KIF1BPQ96EK5 621 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 DACT1Q9NYF0 836 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 CEP135Q66GS9 1140 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 SCAND2PQ9GZW5 306 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 ALDH8A1Q9H2A2 487 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 VPS37CA5D8V6 355 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 UBTFL1P0CB47 393 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 LRRC8AQ8IWT6 810 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 TRIM5Q9C035 493 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 SNRKQ9NRH2 765 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
SMARCAL1-201ENST00000357276 NEMFO60524 1076 aa14.34□□□□□ -0.11
SMARCAL1-201ENST00000357276 GIGYF1O75420 1035 aaPredicted RBP14.34□□□□□ -0.11
SMARCAL1-201ENST00000357276 IQCB1Q15051 598 aa14.34□□□□□ -0.11
SMARCAL1-201ENST00000357276 MRFAP1L1Q96HT8 127 aa14.34□□□□□ -0.11
SMARCAL1-201ENST00000357276 CLIP2Q9UDT6 1046 aa14.34□□□□□ -0.11
SMARCAL1-201ENST00000357276 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.11
SMARCAL1-201ENST00000357276 CKAP2LQ8IYA6 745 aa14.33□□□□□ -0.11
SMARCAL1-201ENST00000357276 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.11
SMARCAL1-201ENST00000357276 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 LEO1Q8WVC0 666 aaPredicted RBP14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 ADCY9O60503 1353 aa14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 PDCP20941 246 aa14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 ZNF165P49910 485 aa14.33□□□□□ -0.12
SMARCAL1-201ENST00000357276 RUFY2Q8WXA3 655 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 ZNF215Q9UL58 517 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 GLRX3O76003 335 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 NECAB1Q8N987 351 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 ERO1AQ96HE7 468 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 DTNBO60941 627 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
SMARCAL1-201ENST00000357276 IGSF1Q8N6C5 1336 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 USP6P35125 1406 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 NR1I2O75469 434 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 CCZ1BP86790 482 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 CCZ1P86791 482 aaPredicted RBP14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 SLC20A2Q08357 652 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 FBXO38Q6PIJ6 1188 aa14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
SMARCAL1-201ENST00000357276 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 SPATA32Q96LK8 384 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 DNAJC25Q9H1X3 360 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 JCADQ9P266 1359 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 CCDC66A2RUB6 948 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 ZNF446Q9NWS9 450 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 ANKARQ7Z5J8 1434 aa14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-201ENST00000357276 TULP2O00295 520 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 SRGAP3O43295 1099 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 H2AFXP16104 143 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 MTX1Q13505 466 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
SMARCAL1-201ENST00000357276 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 PLEKHG3A1L390 1219 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 L2HGDHQ9H9P8 463 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 ARID5BQ14865 1188 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 CCAR2Q8N163 923 aaKnown RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 FLT4P35916 1363 aa14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 TOB2Q14106 344 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 RBM8AQ9Y5S9 174 aaKnown RBP14.28□□□□□ -0.12
SMARCAL1-201ENST00000357276 ZKSCAN1P17029 563 aaPredicted RBP14.27□□□□□ -0.12
SMARCAL1-201ENST00000357276 RNF20Q5VTR2 975 aa14.27□□□□□ -0.12
SMARCAL1-201ENST00000357276 NBPF7P0C2Y1 421 aaPredicted RBP14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 SKILP12757 684 aa14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 RESTQ13127 1097 aa14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 KDM3BQ7LBC6 1761 aa14.27□□□□□ -0.13
SMARCAL1-201ENST00000357276 SLC27A2O14975 620 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms