RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TMEM67Q5HYA8 995 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 CRCPO75575 148 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 TBCAO75347 108 aaKnown RBP19.75■□□□□ 0.75
COL27A1-201ENST00000356083 PTGS1P23219 599 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 OGFOD1Q8N543 542 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 CCDC155Q8N6L0 562 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 ANO10Q9NW15 660 aa19.74■□□□□ 0.75
COL27A1-201ENST00000356083 MICU3Q86XE3 530 aa19.74■□□□□ 0.75
COL27A1-201ENST00000356083 ANAPC4Q9UJX5 808 aa19.74■□□□□ 0.75
COL27A1-201ENST00000356083 C16orf45Q96MC5 204 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-201ENST00000356083 BAG3O95817 575 aa19.74■□□□□ 0.75
COL27A1-201ENST00000356083 ST5P78524 1137 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 CLIP2Q9UDT6 1046 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 CCT6BQ92526 530 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 FLIIQ13045 1269 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 EXOC1Q9NV70 894 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 PPP2R5DQ14738 602 aa19.73■□□□□ 0.75
COL27A1-201ENST00000356083 TMC6Q7Z403 805 aa19.72■□□□□ 0.75
COL27A1-201ENST00000356083 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 SPOUT1Q5T280 376 aaKnown RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 CEP112Q8N8E3 955 aa19.72■□□□□ 0.75
COL27A1-201ENST00000356083 CUL4BQ13620 913 aa19.72■□□□□ 0.75
COL27A1-201ENST00000356083 TTF1Q15361 905 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 MAK16Q9BXY0 300 aaKnown RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 TFIP11Q9UBB9 837 aaKnown RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 RAPGEF2Q9Y4G8 1499 aa19.72■□□□□ 0.75
COL27A1-201ENST00000356083 NAA25Q14CX7 972 aa19.72■□□□□ 0.75
COL27A1-201ENST00000356083 ZSCAN31Q96LW9 406 aaPredicted RBP19.72■□□□□ 0.75
COL27A1-201ENST00000356083 PDE4BQ07343 736 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 PHAXQ9H814 394 aaKnown RBP19.71■□□□□ 0.75
COL27A1-201ENST00000356083 GMNNO75496 209 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 KIF4AO95239 1232 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 RPUSD2Q8IZ73 545 aaKnown RBP19.71■□□□□ 0.75
COL27A1-201ENST00000356083 MCM10Q7L590 875 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 GAS8O95995 478 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 ERCC3P19447 782 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 SLC26A6Q9BXS9 759 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 IMPG2Q9BZV3 1241 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 SNRKQ9NRH2 765 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 TSPY3P0CV98 308 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 TSPY8P0CW00 308 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 KIF5BP33176 963 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 BEGAINQ9BUH8 593 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 GINS2Q9Y248 185 aa19.71■□□□□ 0.75
COL27A1-201ENST00000356083 HSF2BPO75031 334 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 CCDC25Q86WR0 208 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-201ENST00000356083 CLSTN2Q9H4D0 955 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 AFMP43652 599 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 KMT5BQ4FZB7 885 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 IQSEC3Q9UPP2 1182 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-201ENST00000356083 HEATR3Q7Z4Q2 680 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 NOD1Q9Y239 953 aa19.7■□□□□ 0.74
COL27A1-201ENST00000356083 ACSBG1Q96GR2 724 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 NACA2Q9H009 215 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 SEPT14Q6ZU15 432 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 KIF1BPQ96EK5 621 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 ZBTB3Q9H5J0 574 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 GTF2F1P35269 517 aaKnown RBP eCLIP19.69■□□□□ 0.741e-6■■■■□ 20.4
COL27A1-201ENST00000356083 CKAP4Q07065 602 aaKnown RBP19.69■□□□□ 0.74
COL27A1-201ENST00000356083 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 CCDC12Q8WUD4 166 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-201ENST00000356083 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
COL27A1-201ENST00000356083 UAP1Q16222 522 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-201ENST00000356083 RNF34Q969K3 372 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 TRIM47Q96LD4 638 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 CWC25Q9NXE8 425 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-201ENST00000356083 FAM169AQ9Y6X4 670 aa19.69■□□□□ 0.74
COL27A1-201ENST00000356083 GOLIM4O00461 696 aa19.68■□□□□ 0.74
COL27A1-201ENST00000356083 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
COL27A1-201ENST00000356083 NOP9Q86U38 636 aaKnown RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 GTPBP4Q9BZE4 634 aaKnown RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
COL27A1-201ENST00000356083 CFAP157Q5JU67 520 aa19.68■□□□□ 0.74
COL27A1-201ENST00000356083 RNF41Q9H4P4 317 aaPredicted RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 PPANQ9NQ55 473 aaKnown RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 RAB11FIP3O75154 756 aa19.68■□□□□ 0.74
COL27A1-201ENST00000356083 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.68■□□□□ 0.74
COL27A1-201ENST00000356083 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
COL27A1-201ENST00000356083 HARSP12081 509 aaKnown RBP19.67■□□□□ 0.74
COL27A1-201ENST00000356083 NOL3O60936 208 aaKnown RBP19.67■□□□□ 0.74
COL27A1-201ENST00000356083 EXOC5O00471 708 aa19.67■□□□□ 0.74
COL27A1-201ENST00000356083 MFSD6Q6ZSS7 791 aa19.67■□□□□ 0.74
COL27A1-201ENST00000356083 ATP5J2-PTCD1G3V325 749 aa19.67■□□□□ 0.74
COL27A1-201ENST00000356083 PSMD6Q15008 389 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 CCDC89Q8N998 374 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 CEP83Q9Y592 693 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 CSPG5O95196 566 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-201ENST00000356083 RSPH3Q86UC2 560 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 TTC12Q9H892 705 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-201ENST00000356083 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
COL27A1-201ENST00000356083 STAT6P42226 847 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms